RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 T-ENOLP0DO92 83 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 IFNGR1P15260 489 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 FUT1P19526 365 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF83P51522 516 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ROR2Q01974 943 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CAMK2DQ13557 499 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ACKR1Q16570 336 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SAMD4BQ5PRF9 694 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 C16orf89Q6UX73 402 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 HIST3H2AQ7L7L0 130 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ABHD12BQ7Z5M8 362 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MEX3DQ86XN8 651 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 GPR137CQ8N3F9 429 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 C1orf162Q8NEQ5 155 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 HIST1H2ACQ93077 130 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NSL1Q96IY1 281 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 HS6ST2Q96MM7 605 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 FNDC11Q9BVV2 318 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 GORASP2Q9H8Y8 452 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CRLF2Q9HC73 371 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SLC17A5Q9NRA2 495 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RPS6KA6Q9UK32 745 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 EDARQ9UNE0 448 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MED31Q9Y3C7 131 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RNF115Q9Y4L5 304 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 V9GYQ6 96 aa12.35□□□□□ -0.43
HLA-DQB1-202ENST00000399079 A0A096LPE4 126 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 M0R3G1 203 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ARPC2O15144 300 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 GMNNO75496 209 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR7A10O76100 309 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 F13BP05160 661 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 CD3EP07766 207 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 MNAT1P51948 309 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RPL18Q07020 188 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZP4Q12836 540 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 FXNQ16595 210 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 DEFB113Q30KQ7 82 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 HMBOX1Q6NT76 420 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ADAM5Q6NVV9 412 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 TBPL2Q6SJ96 375 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 RINLQ6ZS11 566 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SLC35D2Q76EJ3 337 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 NANOGNBQ7Z5D8 188 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OFCC1Q8IZS5 231 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 PIK3C3Q8NEB9 887 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 KBTBD8Q8NFY9 601 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 OR1K1Q8NGR3 316 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 BCAS4Q8TDM0 211 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 AKAP1Q92667 903 aaKnown RBP eCLIP12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 SGTBQ96EQ0 304 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 GPR35Q9HC97 309 aa12.34□□□□□ -0.43
HLA-DQB1-202ENST00000399079 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 RPL36A-HNRNPH2H7BZ11 118 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 hCG_2039718K7EN88 272 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 M0R1B8 84 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ABCD4O14678 606 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 AKAP8O43823 692 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SEC14L2O76054 403 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 DIRAS1O95057 198 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 HOXC12P31275 282 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IFNA8P32881 189 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 AQP2P41181 271 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 BIDP55957 195 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ARF1P84077 181 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 VLDLRP98155 873 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MELKQ14680 651 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 LAPTM4AQ15012 233 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TRAM2Q15035 370 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CEACAM16Q2WEN9 425 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TBRG1Q3YBR2 411 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 NRMQ8IXM6 262 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 C20orf196Q8IYI0 205 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 C17orf78Q8N4C9 275 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ANKK1Q8NFD2 765 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 BPIFA2Q96DR5 249 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 C7orf34Q96L11 122 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 FOXC2Q99958 501 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 NELFAQ9H3P2 528 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 NMNAT1Q9HAN9 279 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 NDE1Q9NXR1 346 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 NDUFAF4Q9P032 175 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MAGEL2Q9UJ55 1249 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SAMD4AQ9UPU9 718 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ENPP4Q9Y6X5 453 aa12.33□□□□□ -0.44
HLA-DQB1-202ENST00000399079 A0A087WUU8 490 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 HS3ST1O14792 307 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IGF2P01344 180 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IFI30P13284 250 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MAKP20794 623 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CALB2P22676 271 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PRPS1P60891 318 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TUBA1BP68363 451 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TUBA4AP68366 448 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TUBA1AQ71U36 451 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SSX8Q7RTT4 187 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MOSPD2Q8NHP6 518 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 LIPHQ8WWY8 451 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms