RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TMIGD3P0DMS9 266 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 CEACAM8P31997 349 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 CLEC12AQ5QGZ9 265 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 TMEM201Q5SNT2 666 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 RIPPLY2Q5TAB7 128 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 DPY19L2P2Q6ZN68 376 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 SLC35D2Q76EJ3 337 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 FJX1Q86VR8 437 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 OR8D4Q8NGM9 314 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 NRG4Q8WWG1 115 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 ZFP3Q96NJ6 502 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 ZNF385AQ96PM9 386 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 TACO1Q9BSH4 297 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 KATNB1Q9BVA0 655 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 IFT27Q9BW83 186 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 TSSK6Q9BXA6 273 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 POLDIP3Q9BY77 421 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 C8orf4Q9NR00 106 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 ESPL1Q14674 2120 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 POLEQ07864 2286 aa20.98■□□□□ 0.95
TSPAN4-203ENST00000397397 A0A1B0GUH1 482 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 CD14P08571 375 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 IFNGR1P15260 489 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 RAD23AP54725 363 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 CLDN17P56750 224 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 ERVK-25P63136 954 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 SIRPAP78324 504 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 TOP3AQ13472 1001 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 NHLRC1Q6VVB1 395 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 PACRGLQ8N7B6 248 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 CNEP1R1Q8N9A8 125 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 ZIC4Q8N9L1 334 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 TXNDC15Q96J42 360 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 GPX7Q96SL4 187 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 MED29Q9NX70 200 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 ENOPH1Q9UHY7 261 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 NOSIPQ9Y314 301 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 EMC9Q9Y3B6 208 aa20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 RP1L1Q8IWN7 2480 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-203ENST00000397397 PPP1R3DO95685 299 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 CDH2P19022 906 aaPredicted RBP20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 AGTR1P30556 359 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 CRISP1P54107 249 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 FOXF2Q12947 444 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 MELKQ14680 651 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 ACKR1Q16570 336 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 NAXEQ8NCW5 288 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 TXNIPQ9H3M7 391 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 RIBC2Q9H4K1 309 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 NRIP3Q9NQ35 241 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 IER3IP1Q9Y5U9 82 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 NBASA2RRP1 2371 aa20.96■□□□□ 0.95
TSPAN4-203ENST00000397397 HSPB2A8KAH6 182 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 LRRTM2O43300 516 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 BCL10O95999 233 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 IGHMP01871 453 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 CRHP06850 196 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 DAP3P51398 398 aaKnown RBP20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 RPS6KA3P51812 740 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 BIDP55957 195 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 ESRRGP62508 458 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 GUSBP1Q15486 140 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 HSPB2Q16082 182 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 ZIK1Q3SY52 487 aaPredicted RBP20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 FAM214BQ7L5A3 538 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 AAED1Q7RTV5 226 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 NUFIP2Q7Z417 695 aaKnown RBP20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 RND1Q92730 232 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 ERMAPQ96PL5 475 aaPredicted RBP20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 TSPAN32Q96QS1 320 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 EMC6Q9BV81 110 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 VCXQ9H320 206 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 ZNF346Q9UL40 294 aaKnown RBP20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 ADAM18Q9Y3Q7 739 aa20.95■□□□□ 0.95
TSPAN4-203ENST00000397397 A0A0G2JNJ9 132 aa20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 AKAP8O43823 692 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 CTSSP25774 331 aa20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 KIR2DL2P43627 348 aaPredicted RBP20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 PTDSS1P48651 473 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 RPL27P61353 136 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 C4orf17Q53FE4 359 aa20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 TMEM45BQ96B21 275 aa20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 GABARAPL3Q9BY60 117 aa20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 GRHPRQ9UBQ7 328 aa20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 Q9UFV3 132 aa20.95■□□□□ 0.94
TSPAN4-203ENST00000397397 TENM4Q6N022 2769 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 SLC35F4A4IF30 521 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 NPIPB13A6NJU9 1138 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 ZNF726A6NNF4 738 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 NPIPB4C9JG80 1138 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 MRPL33O75394 65 aaKnown RBP20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 NTF4P34130 210 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 NPRL3Q12980 569 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 GINS1Q14691 196 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 NIPAL3Q6P499 406 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 CASP12Q6UXS9 341 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 IQCF1Q8N6M8 205 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 OR2T33Q8NG76 320 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 OR4Q3Q8NH05 313 aa20.94■□□□□ 0.94
TSPAN4-203ENST00000397397 ASB10Q8WXI3 467 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms