RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 GP6Q9HCN6 339 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 EMC3Q9P0I2 261 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 TNFRSF10DQ9UBN6 386 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 ADAM18Q9Y3Q7 739 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 PKD1L2Q7Z442 2459 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 DNAJC13O75165 2243 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 IGHV3-15A0A0B4J1V0 119 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 SLC22A20A6NK97 555 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 CLCA1A8K7I4 914 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 ZNF814B7Z6K7 855 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 PLGP00747 810 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 NR2C1P13056 603 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 EDN3P14138 238 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 ABOP16442 354 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 C3AR1Q16581 482 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 MEDAGQ5VYS4 303 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 PCSK4Q6UW60 755 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 ADGRE4PQ86SQ3 457 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 CCDC71Q8IV32 467 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 CCDC103Q8IW40 242 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 ENTHD1Q8IYW4 607 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 TMEM163Q8TC26 289 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 Q96MT0 163 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 RNF122Q9H9V4 155 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 ASF1BQ9NVP2 202 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 ZNF346Q9UL40 294 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 RNF6Q9Y252 685 aa21.03■□□□□ 0.96
TSPAN4-202ENST00000397396 ZZEF1O43149 2961 aa21.02■□□□□ 0.96
TSPAN4-202ENST00000397396 TEX13CA0A0J9YWL9 993 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 SNTNA6NMZ2 147 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 AHCYL1O43865 530 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 IFNGR1P15260 489 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 ISL1P61371 349 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 RASGEF1BQ0VAM2 473 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 MAD2L1BPQ15013 274 aaPredicted RBP21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 SLC25A30Q5SVS4 291 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 GFRALQ6UXV0 394 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 P4HA3Q7Z4N8 544 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 KDM8Q8N371 416 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 FAM26EQ8N5C1 309 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 RHOXF1Q8NHV9 184 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 ROBO4Q8WZ75 1007 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 Q96M85 177 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 GLRX2Q9NS18 164 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 KLHL13Q9P2N7 655 aa21.02■□□□□ 0.95
TSPAN4-202ENST00000397396 MAP1BP46821 2468 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 KIAA1549Q9HCM3 1950 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 IGKV3D-15A0A087WSY6 115 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 CENPBD1B2RD01 187 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 TRAF3IP2O43734 574 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 RENP00797 406 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 HIST1H1CP16403 213 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 ACVR1BP36896 505 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 SLC35F1Q5T1Q4 408 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 EEF1A1P5Q5VTE0 462 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 TCEANCQ8N8B7 351 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 OR52E2Q8NGJ4 325 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 ZNF519Q8TB69 540 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 FNDC9Q8TBE3 224 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 FAM57AQ8TBR7 257 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 FNDC8Q8TC99 324 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 FBLIM1Q8WUP2 373 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 ASB10Q8WXI3 467 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 CALHM2Q9HA72 323 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 PNPLA3Q9NST1 481 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 CLN6Q9NWW5 311 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 RCE1Q9Y256 329 aa21.01■□□□□ 0.95
TSPAN4-202ENST00000397396 ZNF726A6NNF4 738 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 ZNF716A6NP11 495 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 PRR23D1E9PI22 279 aaPredicted RBP21■□□□□ 0.95
TSPAN4-202ENST00000397396 PRRG2O14669 202 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 TLX2O43763 284 aaPredicted RBP21■□□□□ 0.95
TSPAN4-202ENST00000397396 PRKYO43930 277 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 RAMP1O60894 148 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 TPOP07202 933 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 PRR23D2P0DMB1 279 aaPredicted RBP21■□□□□ 0.95
TSPAN4-202ENST00000397396 HLA-DOBP13765 273 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 ACVR2AP27037 513 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 EFNB1P98172 346 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 CD47Q08722 323 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 ACSF3Q4G176 576 aaPredicted RBP21■□□□□ 0.95
TSPAN4-202ENST00000397396 ARMC4Q5T2S8 1044 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 CREB3L2Q70SY1 520 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 OR5M9Q8NGP3 310 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 OR6X1Q8NH79 312 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 RASD2Q96D21 266 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 TRIB1Q96RU8 372 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 RASSF1Q9NS23 344 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 ZNF226Q9NYT6 803 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 CLCF1Q9UBD9 225 aa21■□□□□ 0.95
TSPAN4-202ENST00000397396 SH3D21A4FU49 640 aa20.99■□□□□ 0.95
TSPAN4-202ENST00000397396 CD8B2A6NJW9 211 aa20.99■□□□□ 0.95
TSPAN4-202ENST00000397396 ZNF724A8MTY0 619 aa20.99■□□□□ 0.95
TSPAN4-202ENST00000397396 ATXN7O15265 892 aaPredicted RBP20.99■□□□□ 0.95
TSPAN4-202ENST00000397396 WISP2O76076 250 aa20.99■□□□□ 0.95
TSPAN4-202ENST00000397396 IGHG1P01857 330 aa20.99■□□□□ 0.95
TSPAN4-202ENST00000397396 KLK2P20151 261 aa20.99■□□□□ 0.95
TSPAN4-202ENST00000397396 CSNK2BP67870 215 aa20.99■□□□□ 0.95
TSPAN4-202ENST00000397396 OCLNQ16625 522 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms