RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 TMEM179BQ7Z7N9 219 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 ADGRG3Q86Y34 549 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 GTPBP8Q8N3Z3 284 aaPredicted RBP12.11□□□□□ -0.47
SEC13-205ENST00000397101 ATG16L2Q8NAA4 619 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 MAPK1IP1LQ8NDC0 245 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 OR4K5Q8NGD3 323 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 POC1BQ8TC44 478 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 DNAJA3Q96EY1 480 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 DHRS1Q96LJ7 313 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 NPAS1Q99742 590 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 CIB1Q99828 191 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 PRSS27Q9BQR3 290 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 TMEM185BQ9H7F4 350 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 ZNF556Q9HAH1 456 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 NTN4Q9HB63 628 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 MAN2C1Q9NTJ4 1040 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 CHRNA9Q9UGM1 479 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 LAMP3Q9UQV4 416 aa12.11□□□□□ -0.47
SEC13-205ENST00000397101 A0A087WUU8 490 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 SH3PXD2BA1X283 911 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 A8MV72 311 aaPredicted RBP12.1□□□□□ -0.47
SEC13-205ENST00000397101 A8MVM7 634 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 PDLIM1O00151 329 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 PIP5K1CO60331 668 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 LYPD3O95274 346 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 PLAUP00749 431 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 IFI30P13284 250 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 ZNF17P17021 662 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 SFTPDP35247 375 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 HMGA2P52926 109 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 UGT2B15P54855 530 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 SIRPAP78324 504 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 SELENBP1Q13228 472 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 SEC23BQ15437 767 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 SLC25A53Q5H9E4 307 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 ANKRD34AQ69YU3 496 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 C3orf33Q6P1S2 294 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 WDR88Q6ZMY6 472 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 MBOAT2Q6ZWT7 520 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 NRMQ8IXM6 262 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 RNF113BQ8IZP6 322 aaKnown RBP12.1□□□□□ -0.47
SEC13-205ENST00000397101 HS3ST5Q8IZT8 346 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 OR9Q2Q8NGE9 314 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 OR4C15Q8NGM1 316 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 OR6K3Q8NGY3 331 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 PFN4Q8NHR9 129 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 SLC7A13Q8TCU3 470 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 GNPDA2Q8TDQ7 276 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 AKAP1Q92667 903 aaKnown RBP eCLIP12.1□□□□□ -0.47
SEC13-205ENST00000397101 NRBF2Q96F24 287 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 PLPPR2Q96GM1 343 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 VCXQ9H320 206 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 VCX3BQ9H321 246 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 YAE1D1Q9NRH1 226 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 TMEM160Q9NX00 188 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 CDC42EP3Q9UKI2 254 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 ORC6Q9Y5N6 252 aa12.1□□□□□ -0.47
SEC13-205ENST00000397101 MAGED1Q9Y5V3 778 aaPredicted RBP12.1□□□□□ -0.47
SEC13-205ENST00000397101 GJE1A6NN92 205 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 AHSA1O95433 338 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 DANCRP0C864 163 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 ANXA8P13928 327 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 CBLP22681 906 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 FKBP2P26885 142 aaKnown RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 ELK4P28324 431 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 GTF2E2P29084 291 aaKnown RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 SUCLG1P53597 346 aaKnown RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 RPS3AP61247 264 aaKnown RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 PON3Q15166 354 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 TMEM176BQ3YBM2 270 aaPredicted RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 STAC2Q6ZMT1 411 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 LSRQ86X29 649 aaPredicted RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 UBQLNLQ8IYU4 475 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 GALNT4Q8N4A0 578 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 AQP11Q8NBQ7 271 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 FNDC9Q8TBE3 224 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 STK35Q8TDR2 534 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 SLC25A43Q8WUT9 341 aaPredicted RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 GTPBP3Q969Y2 492 aaKnown RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 SLC25A36Q96CQ1 311 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 SGTBQ96EQ0 304 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 FAM46AQ96IP4 442 aaKnown RBP12.09□□□□□ -0.47
SEC13-205ENST00000397101 OR5B2Q96R09 309 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 TMEM43Q9BTV4 400 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 TAPBPLQ9BX59 468 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 GRIP2Q9C0E4 1043 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 OR11A1Q9GZK7 315 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 RASSF4Q9H2L5 321 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 SLCO5A1Q9H2Y9 848 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 COQ10BQ9H8M1 238 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 MGAT4BQ9UQ53 548 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 TMEM5Q9Y2B1 443 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 GPR52Q9Y2T5 361 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 ZNF337Q9Y3M9 751 aa12.09□□□□□ -0.47
SEC13-205ENST00000397101 CR1P17927 2039 aa12.08□□□□□ -0.48
SEC13-205ENST00000397101 TRAV36DV7A0A075B6V5 113 aa12.08□□□□□ -0.48
SEC13-205ENST00000397101 C7orf72A4D263 438 aa12.08□□□□□ -0.48
SEC13-205ENST00000397101 ETV2O00321 342 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms