RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SMARCD2Q92925 531 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 TSNAXQ99598 290 aaKnown RBP21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 TSPAN10Q9H1Z9 355 aaPredicted RBP21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 RFPL4AA6NLU0 287 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 RFPL4AL1F8VTS6 287 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 RNGTTO60942 597 aaKnown RBP21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 OR2T7P0C7T2 308 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 DUSP8Q13202 625 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 EIPR1Q53HC9 387 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 HAGHLQ6PII5 290 aaPredicted RBP21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 TMEM52Q8NDY8 209 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 OR4D10Q8NGI6 311 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 OR2T27Q8NH04 317 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 LCN9Q8WX39 176 aa21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 NKX3-1Q99801 234 aaPredicted RBP21.94■■□□□ 1.1
CSNK1E-203ENST00000396832 SLC31A1O15431 190 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 LYPD3O95274 346 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 NID1P14543 1247 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 GABRA3P34903 492 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 FAUP35544 74 aaKnown RBP21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 TNFRSF17Q02223 184 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 ILF3Q12906 894 aaKnown RBP eCLIP21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 TMPRSS11FQ6ZWK6 438 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 RAB11FIP2Q7L804 512 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 GLB1L2Q8IW92 636 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 HEATR5AQ86XA9 2040 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 TBC1D3KA0A087X1G2 549 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 TBC1D3FA6NER0 549 aaPredicted RBP21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 RBBP9O75884 186 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 MEOX2P50222 304 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 SERTAD2Q14140 314 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 MPPED2Q15777 294 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 TBC1D3GQ6DHY5 549 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 OR2L13Q8N349 312 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 MFSD9Q8NBP5 474 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 PRDM9Q9NQV7 894 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 FLRT3Q9NZU0 649 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 IER3IP1Q9Y5U9 82 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 TBC1D3EA0A087X179 549 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 A0A1B0GTQ1 180 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 APOC1P02654 83 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 C4orf46Q504U0 113 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 LINC00469Q8N7U9 141 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 PHYHIPQ92561 330 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 MIB2Q96AX9 1013 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 DNAJA3Q96EY1 480 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 TEX101Q9BY14 249 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 ZNF350Q9GZX5 532 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 CTSFQ9UBX1 484 aa21.93■■□□□ 1.1
CSNK1E-203ENST00000396832 TRAV14DV4A0A0A6YYC5 116 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 CEACAM5P06731 702 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 GP1BAP07359 652 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 CT62P0C5K7 136 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 ITPKBP27987 946 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 SOX2P48431 317 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 LDLRAD3Q86YD5 345 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 SLC35F2Q8IXU6 374 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 PUSL1Q8N0Z8 303 aaKnown RBP21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 CCL4L1Q8NHW4 92 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 NMNAT3Q96T66 252 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 CNN2Q99439 309 aaKnown RBP21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 CHST6Q9GZX3 395 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 WDR13Q9H1Z4 485 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 C2orf42Q9NWW7 574 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 MCIDASD6RGH6 385 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 PRICKLE3O43900 615 aaPredicted RBP21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 CCL5P13501 91 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 EMDP50402 254 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 OTPQ5XKR4 325 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 VITQ6UXI7 678 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 TMEM185BQ9H7F4 350 aa21.92■■□□□ 1.1
CSNK1E-203ENST00000396832 TRIOO75962 3097 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 GRXCR1A8MXD5 290 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 H0YC42 278 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 FGF17O60258 216 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 CTNSO60931 367 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 CPMP14384 443 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 CD96P40200 585 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 OR4N2Q8NGD1 307 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 BIN3Q9NQY0 253 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 PHPT1Q9NRX4 125 aaPredicted RBP21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 STARD5Q9NSY2 213 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 TICRRQ7Z2Z1 1910 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 A0A1B0GWA3 101 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 CTSVO60911 334 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 CD1AP06126 327 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 CALCBP10092 127 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 PVALBP20472 110 aaPredicted RBP21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 RPL4P36578 427 aaKnown RBP21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 CEBPEQ15744 281 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 CCDC157Q569K6 752 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 FAM78AQ5JUQ0 283 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 ZNF784Q8NCA9 323 aaPredicted RBP21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 C15orf40Q8WUR7 153 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 NCDNQ9UBB6 729 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 LAMA1P25391 3075 aa21.91■■□□□ 1.1
CSNK1E-203ENST00000396832 DENND4AQ7Z401 1863 aa21.9■■□□□ 1.1
CSNK1E-203ENST00000396832 SMAD9O15198 467 aaKnown RBP21.9■■□□□ 1.1
CSNK1E-203ENST00000396832 GPRIN2O60269 458 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms