RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 KRCC1Q9NPI7 259 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-202ENST00000396828 PDP1Q9P0J1 537 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-202ENST00000396828 KIF17Q9P2E2 1029 aa9.15□□□□□ -0.94
NEDD8-202ENST00000396828 ING1Q9UK53 422 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-202ENST00000396828 SLC7A7Q9UM01 511 aa9.15□□□□□ -0.94
NEDD8-202ENST00000396828 ICAM5Q9UMF0 924 aa9.15□□□□□ -0.94
NEDD8-202ENST00000396828 A0A0B4J2E0 115 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 A0A1B0GX12 115 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 A0A1W2PNR3 127 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF814B7Z6K7 855 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 CHP2O43745 196 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 NDUFS7O75251 213 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 CCNB2O95067 398 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 DANCRP0C864 163 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 PNMTP11086 282 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 PPP3CBP16298 524 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ENPP1P22413 925 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 IFNGR2P38484 337 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF41P51814 821 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 CARD18P57730 90 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 PPP1R8Q12972 351 aaKnown RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 TAB1Q15750 504 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ALG10BQ5I7T1 473 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 OTUD3Q5T2D3 398 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 SWT1Q5T5J6 900 aaKnown RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF730Q6ZMV8 503 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 CBR4Q8N4T8 237 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ATP6V1C2Q8NEY4 427 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 OR4C15Q8NGM1 316 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 MAGEE2Q8TD90 523 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF775Q96BV0 537 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 MPP4Q96JB8 637 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 HS6ST2Q96MM7 605 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 RBM4BQ9BQ04 359 aaKnown RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 RBM4Q9BWF3 364 aaKnown RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF556Q9HAH1 456 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 VNN3Q9NY84 501 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 GPR52Q9Y2T5 361 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 ORC6Q9Y5N6 252 aa9.14□□□□□ -0.95
NEDD8-202ENST00000396828 MAGED1Q9Y5V3 778 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-202ENST00000396828 TRBV4-1A0A0J9YWV2 114 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 A0A1B0GWA3 101 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ARRDC5A6NEK1 342 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 DPRXA6NFQ7 191 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 OVOL3O00110 214 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 PDLIM1O00151 329 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 SOCS2O14508 198 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 EI24O14681 340 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 OR10H3O60404 316 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ADAM11O75078 769 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 HPRP00739 348 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ADAP00813 363 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ANXA8P13928 327 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 CDKN1AP38936 164 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 SLC1A3P43003 542 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 HTR3AP46098 478 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 LIMS1P48059 325 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ALDH3A2P51648 485 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 TMEM176BQ3YBM2 270 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-202ENST00000396828 NCMAPQ5T1S8 102 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 SFRP5Q5T4F7 317 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 TMEM179BQ7Z7N9 219 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 EPHX4Q8IUS5 362 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 GALNT4Q8N4A0 578 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ATG16L2Q8NAA4 619 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 KBTBD8Q8NFY9 601 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 OR10G2Q8NGC3 310 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 GPR119Q8TDV5 335 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ACOT11Q8WXI4 607 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ST8SIA1Q92185 356 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 PSD2Q9BQI7 771 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 TACO1Q9BSH4 297 aaKnown RBP9.13□□□□□ -0.95
NEDD8-202ENST00000396828 GABARAPL1Q9H0R8 117 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 C12orf10Q9HB07 376 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 GLRX2Q9NS18 164 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 PAQR5Q9NXK6 330 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-202ENST00000396828 KLHL13Q9P2N7 655 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 PRSS50Q9UI38 385 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ALPK2Q86TB3 2170 aa9.13□□□□□ -0.95
NEDD8-202ENST00000396828 ABCA1O95477 2261 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 SH3PXD2BA1X283 911 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 ELOA3DA6NLF2 546 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 H0YJX3 145 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 RAMP1O60894 148 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 PRKCAP17252 672 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 CDH2P19022 906 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 PTNP21246 168 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 CXCR1P25024 350 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 RBM34P42696 430 aaKnown RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 HSPA13P48723 471 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 RAD23AP54725 363 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 PPP2R2BQ00005 443 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 BSPH1Q075Z2 132 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 DAG1Q14118 895 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 LAPTM4AQ15012 233 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 QPRTQ15274 297 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 CLEC12BQ2HXU8 276 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 PGGHGQ32M88 737 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms