RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 CLDN12P56749 244 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 MAT1AQ00266 395 aaKnown RBP12.16□□□□□ -0.46
TRIM40-207ENST00000396581 RBMS2Q15434 407 aaKnown RBP12.16□□□□□ -0.46
TRIM40-207ENST00000396581 MPPED2Q15777 294 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 LINC01590Q5TEZ4 76 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 ULK3Q6PHR2 472 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 NHLRC1Q6VVB1 395 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 OR4E2Q8NGC2 313 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 OR52H1Q8NGJ2 320 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 ARSGQ96EG1 525 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 GPX7Q96SL4 187 aaPredicted RBP12.16□□□□□ -0.46
TRIM40-207ENST00000396581 PFDN2Q9UHV9 154 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 PILRAQ9UKJ1 303 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 OR6C68A6NDL8 312 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 IDSB3KWA1 339 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 H7C417 338 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 CYR61O00622 381 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 GLCEO94923 617 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 GPR75O95800 540 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 ADRA2CP18825 462 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 ZNF10P21506 573 aaPredicted RBP12.15□□□□□ -0.46
TRIM40-207ENST00000396581 IL32P24001 234 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 EMDP50402 254 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 H2BFSP57053 126 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 STX4Q12846 297 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 UBXN2BQ14CS0 331 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 Q499Y3 187 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 FAAP20Q6NZ36 180 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 LRRTM1Q86UE6 522 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 ZNF433Q8N7K0 673 aaPredicted RBP12.15□□□□□ -0.46
TRIM40-207ENST00000396581 OR1S1Q8NH92 325 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 ZCCHC10Q8TBK6 192 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 LCN9Q8WX39 176 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 SLC22A18Q96BI1 424 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 SGTBQ96EQ0 304 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 HSPA12BQ96MM6 686 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 EXOSC3Q9NQT5 275 aaKnown RBP12.15□□□□□ -0.46
TRIM40-207ENST00000396581 MTFP1Q9UDX5 166 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 LRRC72A6NJI9 287 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 XRCC3O43542 346 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 CTSVO60911 334 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 UPK3AO75631 287 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 CT62P0C5K7 136 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 PTHLHP12272 177 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 AK4P27144 223 aaPredicted RBP12.15□□□□□ -0.46
TRIM40-207ENST00000396581 FAUP35544 74 aaKnown RBP12.15□□□□□ -0.46
TRIM40-207ENST00000396581 IGFALSP35858 605 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 KIAA1024LP59773 190 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
TRIM40-207ENST00000396581 ID2Q02363 134 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 TDGQ13569 410 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 TMEM52Q8NDY8 209 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 OR5M9Q8NGP3 310 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 DOK4Q8TEW6 326 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 RIT1Q92963 219 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 OR1F2PQ96R84 312 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 NMNAT3Q96T66 252 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 MKKSQ9NPJ1 570 aaPredicted RBP12.15□□□□□ -0.46
TRIM40-207ENST00000396581 ADAM18Q9Y3Q7 739 aa12.15□□□□□ -0.46
TRIM40-207ENST00000396581 ANXA2P2A6NMY6 339 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 MAGEB1P43366 347 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 TPMTP51580 245 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 GPR143P51810 404 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 GK2Q14410 553 aaPredicted RBP12.14□□□□□ -0.47
TRIM40-207ENST00000396581 KIR2DS3Q14952 304 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 EXOSC7Q15024 291 aaKnown RBP12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ALKAL2Q6UX46 152 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 LRRN1Q6UXK5 716 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 GSG1LQ6UXU4 331 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ABHD13Q7L211 337 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 GLB1L2Q8IW92 636 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 OR52B4Q8NGK2 314 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 OR6K3Q8NGY3 331 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 OR6N1Q8NGY5 312 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ZPLD1Q8TCW7 415 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 HMGB4Q8WW32 186 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 RSC1A1Q92681 617 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 DMRTA2Q96SC8 542 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 LMF2Q9BU23 707 aaKnown RBP12.14□□□□□ -0.47
TRIM40-207ENST00000396581 TAS2R8Q9NYW2 309 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 MED11Q9P086 117 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 A0A087WUJ7 227 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 UBE2QL1A1L167 161 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 SYNDIG1LA6NDD5 238 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 IMPA2O14732 288 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 SLC31A1O15431 190 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ARPC5O15511 151 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ABHD16AO95870 558 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 CBX7O95931 251 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 MELTFP08582 738 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
TRIM40-207ENST00000396581 GABRG2P18507 467 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 SLC25A1P53007 311 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 PSG6Q00889 435 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ALKBH1Q13686 389 aaKnown RBP12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF141Q15928 474 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 C2orf68Q2NKX9 166 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms