RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 SPPL3Q8TCT6 385 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.31
CLIP2-203ENST00000395060 TMEM231Q9H6L2 316 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF281Q9Y2X9 895 aa13.08□□□□□ -0.31
CLIP2-203ENST00000395060 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 PTP4A3O75365 173 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 SPI1P17947 270 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 LIPNQ5VXI9 398 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 TMPRSS11FQ6ZWK6 438 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 ZNF676Q8N7Q3 588 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
CLIP2-203ENST00000395060 COX14Q96I36 57 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 PLEKHA6Q9Y2H5 1048 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 HSD17B2P37059 387 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 ACTA2P62736 377 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 ACTG2P63267 376 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 PRAMEF8Q5VWM4 474 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 PRAMEF7Q5VXH5 474 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 PSRC1Q6PGN9 363 aaPredicted RBP13.08□□□□□ -0.32
CLIP2-203ENST00000395060 KIRREL2Q6UWL6 708 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 DGAT2L6Q6ZPD8 337 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 SPICQ8N5J4 248 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 TMEM106AQ96A25 262 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 ELF4Q99607 663 aaPredicted RBP13.08□□□□□ -0.32
CLIP2-203ENST00000395060 POFUT1Q9H488 388 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 MLXQ9UH92 298 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 PLCL2Q9UPR0 1127 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 ERVK-19Q9WJR5 959 aa13.08□□□□□ -0.32
CLIP2-203ENST00000395060 WDR87Q6ZQQ6 2873 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 ITGA10O75578 1167 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 ATG12O94817 140 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 CMPK1P30085 196 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 GMFBP60983 142 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 OR10K2Q6IF99 312 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 TMEM205Q6UW68 189 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 ZNF627Q7L945 461 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 OR5M9Q8NGP3 310 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 PNPLA2Q96AD5 504 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 ZNF350Q9GZX5 532 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 IL23AQ9NPF7 189 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 HRKO00198 91 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 DCTN6O00399 190 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 RNGTTO60942 597 aaKnown RBP13.07□□□□□ -0.32
CLIP2-203ENST00000395060 B3GALNT1O75752 331 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 OR2A4O95047 310 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 GAS6Q14393 721 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
CLIP2-203ENST00000395060 OR2L13Q8N349 312 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 PLPP7Q8NBV4 271 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 FGF13Q92913 245 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 ASF1BQ9NVP2 202 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 MPDZO75970 2070 aa13.07□□□□□ -0.32
CLIP2-203ENST00000395060 EDDM13A0A1B0GTR0 161 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 CTSVO60911 334 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 AQP2P41181 271 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 TNFRSF17Q02223 184 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 BAMBIQ13145 260 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 SLC35D2Q76EJ3 337 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 DND1Q8IYX4 353 aaKnown RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 BEST3Q8N1M1 668 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 CLRN3Q8NCR9 226 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 OR6N2Q8NGY6 317 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 OR5AK2Q8NH90 309 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 ATOH1Q92858 354 aaPredicted RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 HAVCR1Q96D42 359 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 CPNE2Q96FN4 548 aaPredicted RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 MAFFQ9ULX9 164 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 ZNF337Q9Y3M9 751 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 CFAP54Q96N23 3096 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 LINC01387J3KSC0 135 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 CTDSPLO15194 276 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 NDUFB2O95178 105 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 SLC35G6P0C7Q6 338 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 CD53P19397 219 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 IKZF1Q13422 519 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 BAIAP2L2Q6UXY1 529 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 RNF113BQ8IZP6 322 aaKnown RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 TEX19Q8NA77 164 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 NAP1L6A6NFF2 107 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 DISC1C4P0D8 188 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 PRAMEF2O60811 474 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 CPN1P15169 458 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 UBE2IP63279 158 aaKnown RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 HTRA4P83105 476 aaPredicted RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 SERTAD2Q14140 314 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 ERV3-1Q14264 604 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 OR7A5Q15622 319 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 DEFB110Q30KQ9 67 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 SHEQ5VZ18 495 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 CD163Q86VB7 1156 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 SFTPA2Q8IWL1 248 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 OR2L8Q8NGY9 312 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 TSEN15Q8WW01 171 aaKnown RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 TSNAXQ99598 290 aaKnown RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 ALG12Q9BV10 488 aa13.06□□□□□ -0.32
CLIP2-203ENST00000395060 NKX6-2Q9C056 277 aaPredicted RBP13.06□□□□□ -0.32
CLIP2-203ENST00000395060 ATG5Q9H1Y0 275 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms