RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 GLRXP35754 106 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 VSNL1P62760 191 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 SCGB2A2Q13296 93 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 MAD2L1BPQ15013 274 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-203ENST00000394925 TRMT5Q32P41 509 aaKnown RBP18.15■□□□□ 0.5
TRAF4-203ENST00000394925 GTDC1Q4AE62 458 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 FAM69AQ5T7M9 428 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 ZNF813Q6ZN06 617 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 H1FNTQ75WM6 255 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-203ENST00000394925 LRP11Q86VZ4 500 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 GLB1L3Q8NCI6 653 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-203ENST00000394925 GCDHQ92947 438 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-203ENST00000394925 EMC6Q9BV81 110 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 RACGAP1Q9H0H5 632 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 WDR55Q9H6Y2 383 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-203ENST00000394925 FZR1Q9UM11 496 aa18.15■□□□□ 0.5
TRAF4-203ENST00000394925 FZD7O75084 574 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 TFP02787 698 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 IL6P05231 212 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 GAAP10253 952 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 ZNF35P13682 527 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 ZNF14P17017 642 aaPredicted RBP18.14■□□□□ 0.49
TRAF4-203ENST00000394925 EGR1P18146 543 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 EPHA3P29320 983 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 AQP5P55064 265 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 GKAP1Q5VSY0 366 aaPredicted RBP18.14■□□□□ 0.49
TRAF4-203ENST00000394925 UEVLDQ8IX04 471 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 C20orf196Q8IYI0 205 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 OR51F2Q8NH61 342 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 SLC38A4Q969I6 547 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 YIPF5Q969M3 257 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 ZNF75AQ96N20 296 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 ZNF275Q9NSD4 429 aaPredicted RBP18.14■□□□□ 0.49
TRAF4-203ENST00000394925 MYEF2Q9P2K5 600 aaKnown RBP18.14■□□□□ 0.49
TRAF4-203ENST00000394925 POFUT2Q9Y2G5 429 aa18.14■□□□□ 0.49
TRAF4-203ENST00000394925 LOC102725191A0A1B0GVB3 256 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 TM9SF1O15321 606 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 PPIHO43447 177 aaKnown RBP18.13■□□□□ 0.49
TRAF4-203ENST00000394925 HPRP00739 348 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 ZCCHC18P0CG32 403 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 HLA-DOBP13765 273 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 PTDSS1P48651 473 aaKnown RBP18.13■□□□□ 0.49
TRAF4-203ENST00000394925 COMPP49747 757 aaPredicted RBP18.13■□□□□ 0.49
TRAF4-203ENST00000394925 TMEM33P57088 247 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 KRT71Q3SY84 523 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 REP15Q6BDI9 236 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 FAHD2BQ6P2I3 314 aaPredicted RBP18.13■□□□□ 0.49
TRAF4-203ENST00000394925 C6orf89Q6UWU4 347 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 VPS33AQ96AX1 596 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 ZMYND19Q96E35 227 aaPredicted RBP18.13■□□□□ 0.49
TRAF4-203ENST00000394925 FAHD2AQ96GK7 314 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 TMEM109Q9BVC6 243 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 C12orf10Q9HB07 376 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 PCDHB10Q9UN67 800 aa18.13■□□□□ 0.49
TRAF4-203ENST00000394925 IGKV1D-42A0A075B6H8 117 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 TRAV36DV7A0A075B6V5 113 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 MS4A18H0YCH9 400 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 SLC22A3O75751 556 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 NUDT7P0C024 238 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 B4GALT1P15291 398 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 NQO1P15559 274 aaKnown RBP18.12■□□□□ 0.49
TRAF4-203ENST00000394925 GALK2Q01415 458 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 BST1Q10588 318 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 MFSD13AQ14CX5 517 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 MS4A18Q3C1V0 323 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 C5orf46Q6UWT4 87 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 NET1Q7Z628 596 aaPredicted RBP18.12■□□□□ 0.49
TRAF4-203ENST00000394925 PEG10Q86TG7 708 aaKnown RBP18.12■□□□□ 0.49
TRAF4-203ENST00000394925 MGARPQ8TDB4 240 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 SLC35B4Q969S0 331 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 TXNDC15Q96J42 360 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 B3GAT2Q9NPZ5 323 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 MED29Q9NX70 200 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 THUMPD1Q9NXG2 353 aaKnown RBP18.12■□□□□ 0.49
TRAF4-203ENST00000394925 DUSP13Q9UII6 198 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 WNK2Q9Y3S1 2297 aa18.12■□□□□ 0.49
TRAF4-203ENST00000394925 PKD1L1Q8TDX9 2849 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 A0A1B0GWA3 101 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 TMEM89A2RUT3 159 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 RGS16O15492 202 aaPredicted RBP18.11■□□□□ 0.49
TRAF4-203ENST00000394925 NCR1O76036 304 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 RAB36O95755 333 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 NAT2P11245 290 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 GIPRP48546 466 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 LMO4P61968 165 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 RPS23P62266 143 aaKnown RBP18.11■□□□□ 0.49
TRAF4-203ENST00000394925 RAB1AP62820 205 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 MPP2Q14168 576 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 FXNQ16595 210 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 ALKBH6Q3KRA9 238 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 NXNQ6DKJ4 435 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 ADPRHL1Q8NDY3 354 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 SGMS2Q8NHU3 365 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 RNF217Q8TC41 542 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 AENQ8WTP8 325 aaKnown RBP18.11■□□□□ 0.49
TRAF4-203ENST00000394925 FAM216AQ8WUB2 273 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 MAL2Q969L2 176 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 ITCHQ96J02 903 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 LRR1Q96L50 414 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 PAIP2Q9BPZ3 127 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms