RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 EFNA3P52797 238 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 PER3P56645 1201 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 CTXN1P60606 82 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 TOMM34Q15785 309 aaPredicted RBP12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 UNQ9370/PRO34162Q6UXP9 181 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF550Q7Z398 422 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 SLITRK4Q8IW52 837 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF615Q8N8J6 731 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 FAM174AQ8TBP5 190 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 SMIM4Q8WVI0 70 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 TCTN2Q96GX1 697 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 HRASLSQ9HDD0 168 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 POLE3Q9NRF9 147 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 ABRACLQ9P1F3 81 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 OR5V1Q9UGF6 321 aa12.26□□□□□ -0.45
GTF2F1-201ENST00000394456 CIB4A0PJX0 185 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 LEUTXA8MZ59 168 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 CTNSO60931 367 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 SCO1O75880 301 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 FBXO45P0C2W1 286 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 PI4KAP42356 2102 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 PTH2RP49190 550 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 CCR9P51686 369 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 ACTA2P62736 377 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 ACTG2P63267 376 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 CAMK2DQ13557 499 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF684Q5T5D7 378 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 LIPNQ5VXI9 398 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 POMGNT2Q8NAT1 580 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 GPR137Q96N19 417 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 METTL17Q9H7H0 456 aaPredicted RBP12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 DLL4Q9NR61 685 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 FRRS1LQ9P0K9 344 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 KHNYNO15037 678 aaKnown RBP12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 SRPX2O60687 465 aaPredicted RBP12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 AKR7A3O95154 331 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 HRGP04196 525 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 MAS1P04201 325 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 ANXA3P12429 323 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 RPS4XP62701 263 aaKnown RBP12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 RFPL4BQ6ZWI9 263 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 OVCH1Q7RTY7 1134 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 PRSS58Q8IYP2 241 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 OR8H3Q8N146 312 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 SYNPRQ8TBG9 265 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 ADAMTS14Q8WXS8 1223 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 TSLPQ969D9 159 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 NXF5Q9H1B4 397 aaKnown RBP12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 PNO1Q9NRX1 252 aaKnown RBP12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 CA10Q9NS85 328 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF337Q9Y3M9 751 aa12.25□□□□□ -0.45
GTF2F1-201ENST00000394456 A0A1W2PQ72 361 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ELOA3DA6NLF2 546 aaPredicted RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ARPC1BO15143 372 aaKnown RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 UPK3AO75631 287 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 SERPINA3P01011 423 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ANXA7P20073 488 aaKnown RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ADH7P40394 386 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 OR1D4P47884 311 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF81P51508 661 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 GPR143P51810 404 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 NXPH1P58417 271 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 GRM7Q14831 915 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ELOA3BQ3SY89 546 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 KLHL26Q53HC5 615 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 UBE2NLQ5JXB2 153 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 BTN2A1Q7KYR7 527 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 Q7L0L9 218 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 FAM122BQ7Z309 247 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 OR6V1Q8N148 313 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF680Q8NEM1 530 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 CADM4Q8NFZ8 388 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ELOA3Q8NG57 546 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 LPAR4Q99677 370 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 RXFP3Q9NSD7 469 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 CACNA1EQ15878 2313 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 MEIS3P1A6NDR6 274 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 LILRA5A6NI73 299 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 LMO7DNF2Z398 122 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 PRAMEF2O60811 474 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 GLCEO94923 617 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 PLGP00747 810 aaPredicted RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 DCNP07585 359 aaKnown RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 SULT1A3P0DMM9 295 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 SULT1A4P0DMN0 295 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 CDK2P24941 298 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 GABRA4P48169 554 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 FNTBP49356 437 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 HNRNPKP61978 463 aaKnown RBP eCLIP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF74Q16587 644 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 MESTQ5EB52 335 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ZBTB37Q5TC79 503 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 YOD1Q5VVQ6 348 aaPredicted RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 PWWP2BQ6NUJ5 590 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 TEX261Q6UWH6 196 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 NLRC3Q7RTR2 1065 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 BIVMQ86UB2 503 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 EXD3Q8N9H8 876 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 OR52B4Q8NGK2 314 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ADAD1Q96M93 576 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms