RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 HIF3AQ9Y2N7 669 aa10.09□□□□□ -0.79
TCOF1-203ENST00000394269 PCDHGB7Q9Y5F8 929 aa10.09□□□□□ -0.79
TCOF1-203ENST00000394269 TMEM221A6NGB7 291 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ASAH2BP0C7U1 165 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 SDHBP21912 280 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 POU4F2Q12837 409 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 MESTQ5EB52 335 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 C1orf140Q5VVS0 124 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 MZT2AQ6P582 158 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 CD200R1LQ6Q8B3 271 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 MAMDC2Q7Z304 686 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-203ENST00000394269 GLCCI1Q86VQ1 547 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 CARFQ8N187 725 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ZBTB8BQ8NAP8 495 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-203ENST00000394269 WACQ9BTA9 647 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 SLC19A3Q9BZV2 496 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 SRRQ9GZT4 340 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 BRD7Q9NPI1 651 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ARPC3O15145 178 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ELK1P19419 428 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ADH7P40394 386 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 CLDN12P56749 244 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 KRT74Q7RTS7 529 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 GPAT4Q86UL3 456 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 RHBDD1Q8TEB9 315 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 UBASH3BQ8TF42 649 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 NKX3-1Q99801 234 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-203ENST00000394269 TMEM43Q9BTV4 400 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 EMC6Q9BV81 110 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 EVA1AQ9H8M9 152 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ENAMQ9NRM1 1142 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 TAS2R5Q9NYW4 299 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 TEKT2Q9UIF3 430 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 TBC1D24Q9ULP9 559 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 KLHDC2Q9Y2U9 406 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 TRAV36DV7A0A075B6V5 113 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 PRR32B1ATL7 298 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 GLCEO94923 617 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 SPARCP09486 303 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 CSF3P09919 207 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
TCOF1-203ENST00000394269 SFTPDP35247 375 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 TALDO1P37837 337 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ETV6P41212 452 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 TOMM20Q15388 145 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 IZUMO1Q8IYV9 350 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ZNF248Q8NDW4 579 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 FAM210AQ96ND0 272 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ADAM19Q9H013 955 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 INPP5EQ9NRR6 644 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 PPP4R1LQ9P1A2 415 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 FRYQ5TBA9 3013 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 ZFYVE26Q68DK2 2539 aa10.08□□□□□ -0.8
TCOF1-203ENST00000394269 A0A0G2JMP0 313 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 A0A0X1KG70 313 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 PLPP2O43688 288 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 EIF1AXP47813 144 aaKnown RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 POLR2HP52434 150 aaKnown RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 RAB15P59190 212 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 SQSTM1Q13501 440 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 LIPNQ5VXI9 398 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 FAM220AQ7Z4H9 259 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 POMGNT2Q8NAT1 580 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 OR4M2Q8NGB6 313 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 SLC35B4Q969S0 331 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 ARRDC1-AS1Q9H2J1 176 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 MED29Q9NX70 200 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 POU2F3Q9UKI9 436 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 TP53BP1Q12888 1972 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 FADS1O60427 444 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 EIF4E2O60573 245 aaKnown RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 AKR7A3O95154 331 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 MPZL1O95297 269 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 F10P00742 488 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 RAB3BP20337 219 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 RPS4XP62701 263 aaKnown RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 ACTA2P62736 377 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 PPP3R1P63098 170 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 ACTG2P63267 376 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 FAM69AQ5T7M9 428 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 HES5Q5TA89 166 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 SFXN4Q6P4A7 337 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 LRRN1Q6UXK5 716 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 SERPINA12Q8IW75 414 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 MAML2Q8IZL2 1156 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 OR2T4Q8NH00 348 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 NSMAFQ92636 917 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 NXPE2Q96DL1 559 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 PGLYRP3Q96LB9 341 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 SPSB2Q99619 263 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 NOX4Q9NPH5 578 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 EXOSC3Q9NQT5 275 aaKnown RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 ADAMTS9Q9P2N4 1935 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 COL6A6A6NMZ7 2263 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 OR6C70A6NIJ9 312 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 A8MVM7 634 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 PSKH1P11801 424 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 OR2B6P58173 313 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 TAS2R43P59537 309 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 NANOS3P60323 173 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms