RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ANKS4BQ8N8V4 417 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 POMGNT2Q8NAT1 580 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 ADPRHL1Q8NDY3 354 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 OR1K1Q8NGR3 316 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 OR6S1Q8NH40 331 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 MOSPD2Q8NHP6 518 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 GEMIN6Q8WXD5 167 aaKnown RBP6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 AKAP1Q92667 903 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 HTRA1Q92743 480 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 MUCL1Q96DR8 90 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 SGTBQ96EQ0 304 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 MPP4Q96JB8 637 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 MUS81Q96NY9 551 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 TMEM204Q9BSN7 226 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 FNDC11Q9BVV2 318 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 NELFAQ9H3P2 528 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 ESRP2Q9H6T0 727 aaKnown RBP6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 SEC61A2Q9H9S3 476 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 FKRPQ9H9S5 495 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 GPR35Q9HC97 309 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 NANSQ9NR45 359 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 SLC17A5Q9NRA2 495 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 ZNF229Q9UJW7 825 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 ADAM21Q9UKJ8 722 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 RNF115Q9Y4L5 304 aa6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 ANKRD17O75179 2603 aaKnown RBP6.72□□□□□ -1.33
HMGB3P1-201ENST00000393368 ZNF503-AS2A6NEH8 195 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 B2RBV5 119 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 NDUFAB1O14561 156 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 PDE5AO76074 875 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR7A10O76100 309 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 PRSS23O95084 383 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 F13BP05160 661 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 T-ENOLP0DO92 83 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 IFI30P13284 250 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 HSD17B1P14061 328 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 MAKP20794 623 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 ATP6V1B2P21281 511 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 HOXC12P31275 282 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 RBM34P42696 430 aaKnown RBP6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 GPR4P46093 362 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 VLDLRP98155 873 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 RUNX1T1Q06455 604 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 RPL18Q07020 188 aaKnown RBP6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 ST3GAL3Q11203 375 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 KRT72Q14CN4 511 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 DEFB113Q30KQ7 82 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 TBRG1Q3YBR2 411 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 SAMD4BQ5PRF9 694 aaKnown RBP6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR7E24Q6IFN5 339 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 HMBOX1Q6NT76 420 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 C16orf89Q6UX73 402 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 CYP2R1Q6VVX0 501 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 B3GLCTQ6Y288 498 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC35D2Q76EJ3 337 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 PXKQ7Z7A4 578 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 MYPOPQ86VE0 399 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGFN1Q86VF2 1251 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 C20orf196Q8IYI0 205 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 OFCC1Q8IZS5 231 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 PIK3C3Q8NEB9 887 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 BCL2L2Q92843 193 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 NINJ1Q92982 152 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 NSL1Q96IY1 281 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 CCL19Q99731 98 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 LINC00470Q9BZP3 86 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC19A3Q9BZV2 496 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 POLR2J2Q9GZM3 115 aaKnown RBP6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 POLR2J3Q9H1A7 115 aaKnown RBP6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 CRLF2Q9HC73 371 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 DCAF13Q9NV06 445 aaKnown RBP6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 CD300AQ9UGN4 299 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 RCE1Q9Y256 329 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 MED31Q9Y3C7 131 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 NOX1Q9Y5S8 564 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 ENPP4Q9Y6X5 453 aa6.71□□□□□ -1.34
HMGB3P1-201ENST00000393368 FREM1Q5H8C1 2179 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRAV27A0A087WT01 109 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 A0A087WUU8 490 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGHV1-18A0A0C4DH31 117 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRBV4-1A0A0J9YWV2 114 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 LOC102725191A0A1B0GVB3 256 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF726A6NNF4 738 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 SHISA9B4DS77 424 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 HS3ST1O14792 307 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 AKAP8O43823 692 aaKnown RBP6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 GMNNO75496 209 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 HIST1H2ABP04908 130 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 SOD3P08294 240 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 CELA3BP08861 270 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 THRBP10828 461 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 B4GALT1P15291 398 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 CD40P25942 277 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 CAPZA2P47755 286 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 CSNK1A1P48729 337 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 CDH11P55287 796 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 MYBPC1Q00872 1141 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 TGFBR3Q03167 851 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 TOP3AQ13472 1001 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms