RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 OR52A1Q9UKL2 312 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 PHOX2AO14813 284 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 CD1DP15813 335 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 TMEM239Q8WW34 195 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 MRGPRX2Q96LB1 330 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 ACKR4Q9NPB9 350 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 UNCXA6NJT0 531 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 H3BQ06 376 aaPredicted RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 FZD7O75084 574 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 F2P00734 622 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 H2AFB1P0C5Y9 115 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 GJA5P36382 358 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 SLC35A1P78382 337 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 KLHDC8AQ8IYD2 350 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 LGI3Q8N145 548 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 TGIF2Q9GZN2 237 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 KCNK12Q9HB15 430 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 TRIP12Q14669 1992 aaPredicted RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 TMEM127O75204 238 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 HNRNPA2B1P22626 353 aaKnown RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 ZNF239Q16600 458 aaKnown RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 OLAHQ9NV23 265 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 LGALS8O00214 317 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 CRISP2P16562 243 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 OR8B8Q15620 311 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 ZCWPW2A0A1B0GU75 182 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 DBX1A6NMT0 343 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 ZFAND5O76080 213 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 IDUAP35475 653 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 TCTAP57738 103 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 CSNK1G2P78368 415 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 NPSR1Q6W5P4 371 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 TSEN54Q7Z6J9 526 aaKnown RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 OR6K3Q8NGY3 331 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 LIN28AQ9H9Z2 209 aaKnown RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 RAB22AQ9UL26 194 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 ACSM4P0C7M7 580 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 C12orf76Q8N812 135 aaPredicted RBP13.72□□□□□ -0.21
CCDC50-201ENST00000392455 F2RL3Q96RI0 385 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 HSD3B7Q9H2F3 369 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 DLL4Q9NR61 685 aa13.72□□□□□ -0.21
CCDC50-201ENST00000392455 NUDT21O43809 227 aaKnown RBP13.71□□□□□ -0.21
CCDC50-201ENST00000392455 TPMTP51580 245 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 PIGFQ07326 219 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 EBPQ15125 230 aaKnown RBP13.71□□□□□ -0.21
CCDC50-201ENST00000392455 USP53Q70EK8 1073 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 HHIPL1Q96JK4 782 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 IKZF5Q9H5V7 419 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 FAM72CH0Y354 149 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 FAM72AQ5TYM5 149 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 KCTD11Q693B1 232 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 FAM72DQ6L9T8 149 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 UBE3DQ7Z6J8 389 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 FAM72BQ86X60 149 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 IL17FQ96PD4 163 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 CLCF1Q9UBD9 225 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 A0A1W2PQ09 198 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 OR2T7P0C7T2 308 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.21
CCDC50-201ENST00000392455 STT3AP46977 705 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 RELAQ04206 551 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 IKZF1Q13422 519 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 POU4F3Q15319 338 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 MEPCEQ7L2J0 689 aaKnown RBP13.71□□□□□ -0.21
CCDC50-201ENST00000392455 IGSF8Q969P0 613 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 CRB3Q9BUF7 120 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 CHD3Q12873 2000 aaKnown RBP13.71□□□□□ -0.21
CCDC50-201ENST00000392455 ETV4P43268 484 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 SMIM3Q9BZL3 60 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 AKAP6Q13023 2319 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 SNED1Q8TER0 1413 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 ANKRD31Q8N7Z5 1873 aa13.71□□□□□ -0.21
CCDC50-201ENST00000392455 IMP4Q96G21 291 aaKnown RBP13.71□□□□□ -0.22
CCDC50-201ENST00000392455 BOCQ9BWV1 1114 aa13.71□□□□□ -0.22
CCDC50-201ENST00000392455 LHPPQ9H008 270 aa13.71□□□□□ -0.22
CCDC50-201ENST00000392455 V9GYS6 101 aa13.71□□□□□ -0.22
CCDC50-201ENST00000392455 KRBA1A5PL33 1030 aa13.71□□□□□ -0.22
CCDC50-201ENST00000392455 MRPL33O75394 65 aaKnown RBP13.71□□□□□ -0.22
CCDC50-201ENST00000392455 SNAI1O95863 264 aaPredicted RBP13.71□□□□□ -0.22
CCDC50-201ENST00000392455 CDKN2DP55273 166 aa13.71□□□□□ -0.22
CCDC50-201ENST00000392455 OR5I1Q13606 314 aa13.71□□□□□ -0.22
CCDC50-201ENST00000392455 GDPD3Q7L5L3 318 aa13.71□□□□□ -0.22
CCDC50-201ENST00000392455 OR2F2O95006 317 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 GPLD1P80108 840 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 OR2F1Q13607 317 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TEX261Q6UWH6 196 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 LINC00299Q6ZSB3 139 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 L3HYPDHQ96EM0 354 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 UCK1Q9HA47 277 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 U3KQ87 197 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 CKAP5Q14008 2032 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 FAM166BA8MTA8 275 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 FZD9O00144 591 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TNFSF12O43508 249 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 ZNF85Q03923 595 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 CDK5R2Q13319 367 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 TECRLQ5HYJ1 363 aa13.7□□□□□ -0.22
CCDC50-201ENST00000392455 C3orf38Q5JPI3 329 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms