RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CALM2P0DP24 149 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 CALM3P0DP25 149 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 ETS1P14921 441 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TCN1P20061 433 aaPredicted RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TPSB2P20231 275 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 WARSP23381 471 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 SSR1P43307 286 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 KIR3DL2P43630 455 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 HSPA2P54652 639 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 SLC7A9P82251 487 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 NCBP1Q09161 790 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 SYCNQ0VAF6 134 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 BAMBIQ13145 260 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 MXD4Q14582 209 aaPredicted RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 LASP1Q14847 261 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 PDK1Q15118 436 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TPSAB1Q15661 275 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TATDN3Q17R31 274 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TMEM52BQ4KMG9 183 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 LINC01620Q4KN68 170 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TPGS2Q68CL5 300 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 FAM71F2Q6NXP2 309 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 BLOC1S2Q6QNY1 142 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 SPINT4Q6UDR6 99 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 PGAP1Q75T13 922 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 GET4Q7L5D6 327 aaPredicted RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 CATSPER4Q7RTX7 472 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 RABEPKQ7Z6M1 372 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 KIAA1328Q86T90 577 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TICAM2Q86XR7 235 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 NECAP1Q8NC96 275 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 APCDD1LQ8NCL9 501 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 FBXL13Q8NEE6 735 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 OR52B4Q8NGK2 314 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 OR5L2Q8NGL0 311 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 COQ8AQ8NI60 647 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 NANPQ8TBE9 248 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 SDR42E1Q8WUS8 393 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 ZCCHC13Q8WW36 166 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 AMDHD1Q96NU7 426 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 CLCC1Q96S66 551 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 ATP6V0BQ99437 205 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 MRPL45Q9BRJ2 306 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 SPXQ9BT56 116 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 ZSCAN5AQ9BUG6 496 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TMEM59Q9BXS4 323 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 GABARAPL3Q9BY60 117 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 POPDC2Q9HBU9 364 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 THUMPD1Q9NXG2 353 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 CALYQ9NYX4 217 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 SPATA7Q9P0W8 599 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 SHPKQ9UHJ6 478 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 PACSIN2Q9UNF0 486 aaPredicted RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 RASD1Q9Y272 281 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 GSTK1Q9Y2Q3 226 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 AK6Q9Y3D8 172 aaKnown RBP0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 TUBGCP6Q96RT7 1819 aa0.57□□□□□ -2.32
SNORD28B-201ENST00000390993 PTPRTO14522 1441 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 A0A1B0GVX0 72 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 J3QKU1 62 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 DYNC1I1O14576 645 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 KMOO15229 486 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 CTAGE5O15320 804 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 RGS16O15492 202 aaPredicted RBP0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 MED7O43513 233 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 MGRN1O60291 552 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 BCAS2O75934 225 aaPredicted RBP0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 OXSR1O95747 527 aaPredicted RBP0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 CCNE2O96020 404 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 IGHDP01880 384 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 OPN1MWP04001 364 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 FABP3P05413 133 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 CAPN1P07384 714 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 OPN1MW2P0DN77 364 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 OPN1MW3P0DN78 364 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 DTYMKP23919 212 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 AK4P27144 223 aaPredicted RBP0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 HTR2AP28223 471 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 GCAP28676 217 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 CCND2P30279 289 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 ADRA1AP35348 466 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 OPRK1P41145 380 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 MAP3K8P41279 467 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 CSNK1A1P48729 337 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 SUB1P53999 127 aaKnown RBP eCLIP0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 UGT2B15P54855 530 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 GMFBP60983 142 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 ACVR1Q04771 509 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 MEF2CQ06413 473 aaPredicted RBP0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 PDIA2Q13087 525 aaKnown RBP0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 SPP2Q13103 211 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 AQP6Q13520 282 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 FZD2Q14332 565 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 OXA1LQ15070 435 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 SLC15A2Q16348 729 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 SMUG1Q53HV7 270 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 THEM4Q5T1C6 240 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 GPRC6AQ5T6X5 926 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 RAB12Q6IQ22 244 aa0.56□□□□□ -2.32
SNORD28B-201ENST00000390993 CNIH2Q6PI25 160 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms