RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZNF416Q9BWM5 594 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 GON7Q9BXV9 100 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 RAB17Q9H0T7 212 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 VCX2Q9H322 139 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 CYP3A43Q9HB55 503 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 TREM1Q9NP99 234 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 IL26Q9NPH9 171 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 LZTFL1Q9NQ48 299 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 LHX9Q9NQ69 397 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 FKBP14Q9NWM8 211 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 HYPKQ9NX55 129 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 KLHL28Q9NXS3 571 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 KCNN3Q9UGI6 736 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 KIF25Q9UIL4 384 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ASF1AQ9Y294 204 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 MRPS7Q9Y2R9 242 aaKnown RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 AP4B1Q9Y6B7 739 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 GPR179Q6PRD1 2367 aa1.59□□□□□ -2.16
TRAV40-201ENST00000390467 UBE4BO95155 1302 aa1.59□□□□□ -2.16
TRAV40-201ENST00000390467 SH3TC1Q8TE82 1336 aa1.59□□□□□ -2.16
TRAV40-201ENST00000390467 RAD50Q92878 1312 aa1.59□□□□□ -2.16
TRAV40-201ENST00000390467 SBNO1A3KN83 1393 aa1.59□□□□□ -2.16
TRAV40-201ENST00000390467 CABIN1Q9Y6J0 2220 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PPIAL4EA0A075B759 164 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PPIAL4CA0A0B4J2A2 164 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 A0A0G2JLM5 398 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 ERICH2A1L162 156 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 HELTA6NFD8 242 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 OR5K4A6NMS3 321 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 OR52A4PA6NMU1 304 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 GABRR3A8MPY1 467 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 IQCF5A8MTL0 148 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PPIAL4DF5H284 164 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 K7EQM0 130 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 LAD1O00515 517 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 AKR7A2O43488 359 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 SSX5O60225 188 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 DNAJB6O75190 326 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 RHOBTB1O94844 696 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 CDK14O94921 469 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 TGM6O95932 706 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 AGTP01019 485 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 HBQ1P09105 142 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 CLTAP09496 248 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 GIPP09681 153 aaPredicted RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 OR8G3PP0DMU2 310 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PPIAL4FP0DN26 164 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 CYP2B6P20813 491 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 CYP2F1P24903 491 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 RRM2P31350 389 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 EFNB2P52799 333 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 CLDN8P56748 225 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 POLR2GP62487 172 aaKnown RBP eCLIP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 XIAPP98170 497 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 KDSRQ06136 332 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 TGM3Q08188 693 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 IL18Q14116 193 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 WDR43Q15061 677 aaKnown RBP eCLIP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 STK38Q15208 465 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 NRF1Q16656 503 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 KLHL40Q2TBA0 621 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 SLC36A3Q495N2 470 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PHYHD1Q5SRE7 291 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 CLEC6AQ6EIG7 209 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PMF1Q6P1K2 205 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 Q6ZR03 302 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 TRMT10CQ7L0Y3 403 aaKnown RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 ZDHHC21Q8IVQ6 265 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 MFSD6LQ8IWD5 586 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 C6orf223Q8N319 242 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 COMMD1Q8N668 190 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 ANKFN1Q8N957 763 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 FADS6Q8N9I5 356 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 BPIFCQ8NFQ6 507 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 NPBQ8NG41 125 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 OR56B1Q8NGI3 324 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 OR10T2Q8NGX3 314 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 PHOSPHO2Q8TCD6 241 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 LKAAEAR1Q8TD35 194 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 AENQ8WTP8 325 aaKnown RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 MITD1Q8WV92 249 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 TSEN15Q8WW01 171 aaKnown RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 SELENOMQ8WWX9 145 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 RLN3Q8WXF3 142 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 KIFAP3Q92845 792 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF707Q96C28 371 aaPredicted RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 SLC41A3Q96GZ6 507 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 TIMD4Q96H15 378 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 C12orf66Q96MD2 445 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF607Q96SK3 696 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 ACBD6Q9BR61 282 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 C9orf16Q9BUW7 83 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 TSGA10Q9BZW7 698 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 FAM192AQ9GZU8 254 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 DMAP1Q9NPF5 467 aaPredicted RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 FARSBQ9NSD9 589 aaKnown RBP1.58□□□□□ -2.16
TRAV40-201ENST00000390467 ETNK2Q9NVF9 386 aa1.58□□□□□ -2.16
TRAV40-201ENST00000390467 SLC39A1Q9NY26 324 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms