RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 IL17RDQ8NFM7 739 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 ZNF48Q96MX3 618 aaPredicted RBP10.06□□□□□ -0.8
SOD1-202ENST00000389995 ZIM3Q96PE6 472 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 PKP2Q99959 881 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 SLC38A1Q9H2H9 487 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 OR51B6Q9H340 312 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 PIF1Q9H611 641 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 MOV10Q9HCE1 1003 aaKnown RBP10.06□□□□□ -0.8
SOD1-202ENST00000389995 POLE3Q9NRF9 147 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 MED29Q9NX70 200 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 ZNF69Q9UC07 566 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 RASD1Q9Y272 281 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 SOX21Q9Y651 276 aaPredicted RBP10.06□□□□□ -0.8
SOD1-202ENST00000389995 RYR3Q15413 4870 aa10.06□□□□□ -0.8
SOD1-202ENST00000389995 A8MVM7 634 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 J3QLI3 93 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 TM9SF1O15321 606 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 VAMP5O95183 116 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 GUSBP08236 651 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 PATE4P0C8F1 98 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 IL7RP16871 459 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 ARRB2P32121 409 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 ACAA2P42765 397 aaKnown RBP10.05□□□□□ -0.8
SOD1-202ENST00000389995 ETV4P43268 484 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 RAD52P43351 418 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 RPS5P46782 204 aaKnown RBP10.05□□□□□ -0.8
SOD1-202ENST00000389995 PTDSS1P48651 473 aaKnown RBP10.05□□□□□ -0.8
SOD1-202ENST00000389995 BAMBIQ13145 260 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 FXNQ16595 210 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 NKPD1Q17RQ9 610 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 GSG1Q2KHT4 349 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 TRMT5Q32P41 509 aaKnown RBP10.05□□□□□ -0.8
SOD1-202ENST00000389995 SAXO2Q658L1 398 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 REP15Q6BDI9 236 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 JAZF1Q86VZ6 243 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 C1QL4Q86Z23 238 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 WDFY1Q8IWB7 410 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 RAB39BQ96DA2 213 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 PDP1Q9P0J1 537 aaPredicted RBP10.05□□□□□ -0.8
SOD1-202ENST00000389995 TAAR3PQ9P1P4 343 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 B3GAT1Q9P2W7 334 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 MARCOQ9UEW3 520 aaPredicted RBP10.05□□□□□ -0.8
SOD1-202ENST00000389995 WIPI2Q9Y4P8 454 aa10.05□□□□□ -0.8
SOD1-202ENST00000389995 ZNF99A8MXY4 864 aaPredicted RBP10.04□□□□□ -0.8
SOD1-202ENST00000389995 FTCDNL1E5RQL4 147 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 FAAHO00519 579 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 RNASET2O00584 256 aaKnown RBP10.04□□□□□ -0.8
SOD1-202ENST00000389995 ERLIN1O75477 346 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 AGR2O95994 175 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 SERPINE1P05121 402 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 TFPTP0C1Z6 253 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 FAM157BP0CG42 384 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 B4GALT1P15291 398 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 ZNF43P17038 809 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 CBLP22681 906 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 UQCRC2P22695 453 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 CHI3L1P36222 383 aaPredicted RBP10.04□□□□□ -0.8
SOD1-202ENST00000389995 GIPRP48546 466 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 MAP2K6P52564 334 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 CLDN8P56748 225 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 MRPS11P82912 194 aaKnown RBP10.04□□□□□ -0.8
SOD1-202ENST00000389995 GALK2Q01415 458 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 RAB39AQ14964 217 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 KLF17Q5JT82 389 aaPredicted RBP10.04□□□□□ -0.8
SOD1-202ENST00000389995 DOK3Q7L591 496 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 RNF130Q86XS8 419 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 VRK2Q86Y07 508 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 CMIPQ8IY22 773 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 OIT3Q8WWZ8 545 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 TUBGCP3Q96CW5 907 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 KTI12Q96EK9 354 aaPredicted RBP10.04□□□□□ -0.8
SOD1-202ENST00000389995 PPP1R36Q96LQ0 422 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 OR2M2Q96R28 347 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 PAIP2Q9BPZ3 127 aaKnown RBP10.04□□□□□ -0.8
SOD1-202ENST00000389995 SLC35A5Q9BS91 424 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 EMC6Q9BV81 110 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 PTDSS2Q9BVG9 487 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 DPY30Q9C005 99 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 SSU72Q9NP77 194 aaKnown RBP10.04□□□□□ -0.8
SOD1-202ENST00000389995 ZNF224Q9NZL3 707 aa10.04□□□□□ -0.8
SOD1-202ENST00000389995 IGHV1-69-2A0A0G2JMI3 117 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 C17orf100A8MU93 164 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 BIRC5O15392 142 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 TPD52L2O43399 206 aaKnown RBP10.03□□□□□ -0.8
SOD1-202ENST00000389995 ITM2AO43736 263 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 NPIPB7O75200 414 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 CCL2P13500 99 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 UQCRBP14927 111 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 RPS4Y1P22090 263 aaKnown RBP10.03□□□□□ -0.8
SOD1-202ENST00000389995 PCGF2P35227 344 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 ABCE1P61221 599 aaKnown RBP10.03□□□□□ -0.8
SOD1-202ENST00000389995 ERVS71-1P61550 626 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 IL13RA1P78552 427 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 HOXC5Q00444 222 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 GLO1Q04760 184 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 C1DQ13901 141 aaKnown RBP10.03□□□□□ -0.8
SOD1-202ENST00000389995 TSTQ16762 297 aaKnown RBP10.03□□□□□ -0.8
SOD1-202ENST00000389995 GSTA3Q16772 222 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 COX20Q5RI15 118 aa10.03□□□□□ -0.8
SOD1-202ENST00000389995 ZNF813Q6ZN06 617 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms