RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 IL21Q9HBE4 155 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 TAS2R5Q9NYW4 299 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 HHLA2Q9UM44 414 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CA5BQ9Y2D0 317 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 H0YGG7 62 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 ARF3P61204 181 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 UBE2IP63279 158 aaKnown RBP12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CSNK2A1P68400 391 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 PLCXD2Q0VAA5 305 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 TMEM81Q6P7N7 255 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CSNK2A3Q8NEV1 391 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 C19orf43Q9BQ61 176 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 STEAP1Q9UHE8 339 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 KCNIP3Q9Y2W7 256 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CDC42EP2O14613 210 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 MED6O75586 246 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CD3DP04234 171 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 SEMG1P04279 462 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 RRASP10301 218 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 PNMTP11086 282 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 C5AR1P21730 350 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZP3P21754 424 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 S100GP29377 79 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 MEF2DQ14814 521 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 C1orf189Q5VU69 101 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 COX15Q7KZN9 410 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 SLC2A12Q8TD20 617 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 STK35Q8TDR2 534 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 TCTEX1D2Q8WW35 142 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 DIO2Q92813 273 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 C3orf49Q96BT1 292 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 JSRP1Q96MG2 331 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CDC6Q99741 560 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF649Q9BS31 505 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 C20orf141Q9NUB4 165 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CGGBP1Q9UFW8 167 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 H7C417 338 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 P2RX6O15547 441 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 RBMXL2O75526 392 aaKnown RBP12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 UBL4AP11441 157 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CD53P19397 219 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 FAM189A2Q15884 450 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 C3orf33Q6P1S2 294 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 TRAPPC6BQ86SZ2 158 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 ADGRG3Q86Y34 549 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 FBXL6Q8N531 539 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 C12orf57Q99622 126 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 ETV7Q9Y603 341 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 PRAMEF25A6NGN4 478 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 HIDE1A8MVS5 230 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 PMS2P2O95744 297 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 NME2P22392 152 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 HTR2CP28335 458 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 P2RX1P51575 399 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 C21orf58P58505 322 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 FLI1Q01543 452 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 MEP1BQ16820 701 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 Q6ZTK2 550 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR5T3Q8NGG3 340 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 SMARCD2Q92925 531 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 NXPE3Q969Y0 559 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 CXorf58Q96LI9 332 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 PFDN5Q99471 154 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 SIRT3Q9NTG7 399 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 TRIP12Q14669 1992 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 TMEM212A6NML5 194 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 AVPI1Q5T686 147 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 FAM122BQ7Z309 247 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 CMIPQ8IY22 773 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 FAM71F1Q96KD3 344 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 CRB3Q9BUF7 120 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 PARPBPQ9NWS1 579 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 KLRF1Q9NZS2 232 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 TSPAN11A1L157 253 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 CDC14CA4D256 554 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 MTRF1O75570 445 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR8U9P0C7N5 309 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 PGCP20142 388 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 ARRB1P49407 418 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 DPY19L2P2Q6ZN68 376 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 CDH26Q8IXH8 852 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 IL17RCQ8NAC3 791 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR6N1Q8NGY5 312 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 TOMM40LQ969M1 308 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 NKX3-1Q99801 234 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 MBNL1Q9NR56 388 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 ALPK2Q86TB3 2170 aa12.08□□□□□ -0.48
TRAPPC9-201ENST00000389328 TMEM269A0A1B0GVZ9 245 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 LINC00862A6NCI5 91 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 CRTAPO75718 401 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 SPI1P17947 270 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 RUNX3Q13761 415 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 HLXQ14774 488 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZXDCQ2QGD7 858 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF793Q6ZN11 406 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR4C16Q8NGL9 310 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms