RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 PIK3C3Q8NEB9 887 aa12.27□□□□□ -0.45
SHOX-202ENST00000381575 PROX1Q92786 737 aa12.27□□□□□ -0.45
SHOX-202ENST00000381575 MS4A3Q96HJ5 214 aa12.27□□□□□ -0.45
SHOX-202ENST00000381575 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.45
SHOX-202ENST00000381575 TMEM38AQ9H6F2 299 aa12.27□□□□□ -0.45
SHOX-202ENST00000381575 TMEM27Q9HBJ8 222 aa12.27□□□□□ -0.45
SHOX-202ENST00000381575 SELENONQ9NZV5 590 aa12.27□□□□□ -0.45
SHOX-202ENST00000381575 SLC13A4Q9UKG4 626 aa12.27□□□□□ -0.45
SHOX-202ENST00000381575 SLC35F4A4IF30 521 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 VWC2LB2RUY7 222 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 B9A039 149 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 C11orf98E9PRG8 122 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 hCG_2039718K7EN88 272 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 HLA-HP01893 362 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 CBR1P16152 277 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 GPX2P18283 190 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 IGFBP5P24593 272 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 NR4A2P43354 598 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 SRSF2Q01130 221 aaKnown RBP12.26□□□□□ -0.45
SHOX-202ENST00000381575 PMS2P3Q13401 168 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 CYP51A1Q16850 503 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 C1QTNF12Q5T7M4 302 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 FAM91A1Q658Y4 838 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 DHDDSQ86SQ9 333 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 RETREG3Q86VR2 466 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 RBM45Q8IUH3 476 aaKnown RBP12.26□□□□□ -0.45
SHOX-202ENST00000381575 HIPK4Q8NE63 616 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 VANGL1Q8TAA9 524 aaPredicted RBP12.26□□□□□ -0.45
SHOX-202ENST00000381575 ZNF607Q96SK3 696 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 PLK3Q9H4B4 646 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 ANGPT4Q9Y264 503 aa12.26□□□□□ -0.45
SHOX-202ENST00000381575 PRORSD1PA6NEY8 169 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 CPSF4LA6NMK7 179 aaKnown RBP12.25□□□□□ -0.45
SHOX-202ENST00000381575 ZNF99A8MXY4 864 aaPredicted RBP12.25□□□□□ -0.45
SHOX-202ENST00000381575 AKAP8O43823 692 aaKnown RBP12.25□□□□□ -0.45
SHOX-202ENST00000381575 MFN2O95140 757 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 IFNA2P01563 188 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 FAM157CP0CG43 387 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 CD79AP11912 226 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 B4GALT1P15291 398 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 ATP4BP51164 291 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 PIGFQ07326 219 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 PUDPQ08623 228 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 SNTB2Q13425 540 aaKnown RBP12.25□□□□□ -0.45
SHOX-202ENST00000381575 NPTX1Q15818 432 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 MSMPQ1L6U9 139 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 IQCCQ4KMZ1 466 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 RUNDC3AQ59EK9 446 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 C5orf46Q6UWT4 87 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 WDR88Q6ZMY6 472 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 ZNF813Q6ZN06 617 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 SPATA21Q7Z572 469 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 RANBP3LQ86VV4 465 aaPredicted RBP12.25□□□□□ -0.45
SHOX-202ENST00000381575 TSPYL5Q86VY4 417 aaPredicted RBP12.25□□□□□ -0.45
SHOX-202ENST00000381575 C20orf196Q8IYI0 205 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 CDK20Q8IZL9 346 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 ADPRHL1Q8NDY3 354 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 GPR32P1Q8NGA4 272 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 OR4F15Q8NGB8 312 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 OR4D11Q8NGI4 311 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 SPATA3Q8NHX4 192 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 MSI2Q96DH6 328 aaKnown RBP12.25□□□□□ -0.45
SHOX-202ENST00000381575 SLC41A3Q96GZ6 507 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 ZNF317Q96PQ6 595 aaPredicted RBP12.25□□□□□ -0.45
SHOX-202ENST00000381575 EPYCQ99645 322 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 MCHR1Q99705 422 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 SOX7Q9BT81 388 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 ASPNQ9BXN1 380 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 BEX2Q9BXY8 128 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 BPESC1Q9GZL8 116 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 CDC42EP3Q9UKI2 254 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 CORO2BQ9UQ03 480 aa12.25□□□□□ -0.45
SHOX-202ENST00000381575 TMEM129A0AVI4 362 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 LRP5LA4QPB2 252 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 LYNX1G3V0Z9 82 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 KPNA4O00629 521 aaPredicted RBP12.24□□□□□ -0.45
SHOX-202ENST00000381575 PHF1O43189 567 aaPredicted RBP12.24□□□□□ -0.45
SHOX-202ENST00000381575 LMX1BO60663 402 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 SERPINB7O75635 380 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 LYNX1P0DP58 116 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 APEHP13798 732 aaKnown RBP12.24□□□□□ -0.45
SHOX-202ENST00000381575 NPR2P20594 1047 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 AHCYP23526 432 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 PCBP3P57721 371 aaKnown RBP12.24□□□□□ -0.45
SHOX-202ENST00000381575 DAG1Q14118 895 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 MFSD13AQ14CX5 517 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 EFNB3Q15768 340 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 DUSP7Q16829 419 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 C3orf36Q3SXR2 165 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 NET1Q7Z628 596 aaPredicted RBP12.24□□□□□ -0.45
SHOX-202ENST00000381575 FAM169BQ8N8A8 192 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 C11orf65Q8NCR3 313 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 NUP37Q8NFH4 326 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 OR6T1Q8NGN1 323 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 OR6N1Q8NGY5 312 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 ARHGDIGQ99819 225 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 ULBP2Q9BZM5 246 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 TPK1Q9H3S4 243 aa12.24□□□□□ -0.45
SHOX-202ENST00000381575 INTS9Q9NV88 658 aaKnown RBP12.24□□□□□ -0.45
SHOX-202ENST00000381575 MRPL39Q9NYK5 338 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms