RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 RELL2Q8NC24 303 aaPredicted RBP13.71□□□□□ -0.21
PDGFB-202ENST00000381551 CA5BP1Q8WTZ4 195 aa13.71□□□□□ -0.21
PDGFB-202ENST00000381551 GTPBP3Q969Y2 492 aaKnown RBP13.71□□□□□ -0.21
PDGFB-202ENST00000381551 NIPSNAP1Q9BPW8 284 aa13.71□□□□□ -0.21
PDGFB-202ENST00000381551 UCK2Q9BZX2 261 aa13.71□□□□□ -0.21
PDGFB-202ENST00000381551 PIGMQ9H3S5 423 aa13.71□□□□□ -0.21
PDGFB-202ENST00000381551 INIPQ9NRY2 104 aa13.71□□□□□ -0.21
PDGFB-202ENST00000381551 PROCRQ9UNN8 238 aa13.71□□□□□ -0.21
PDGFB-202ENST00000381551 ALPK2Q86TB3 2170 aa13.71□□□□□ -0.22
PDGFB-202ENST00000381551 A8MXE2 369 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 MSTNO14793 375 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 SERPINI2O75830 405 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 NDUFB2O95178 105 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 BAG2O95816 211 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 ADAP00813 363 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF23P17027 643 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 OR3A2P47893 321 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 CTXN1P60606 82 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 SLC25A35Q3KQZ1 300 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 FAHD1Q6P587 224 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 SMARCD3Q6STE5 483 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 THSD4Q6ZMP0 1018 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 RASSF6Q6ZTQ3 369 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 SLC35D2Q76EJ3 337 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 KIF18BQ86Y91 864 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF100Q8IYN0 542 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 OPN3Q9H1Y3 402 aaPredicted RBP13.7□□□□□ -0.22
PDGFB-202ENST00000381551 MED29Q9NX70 200 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 IL20Q9NYY1 176 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 OAZ3Q9UMX2 235 aa13.7□□□□□ -0.22
PDGFB-202ENST00000381551 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
PDGFB-202ENST00000381551 A0A1W2PRG6 482 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 SLC35F4A4IF30 521 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 NPIPB13A6NJU9 1138 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 NPIPB4C9JG80 1138 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 MCIDASD6RGH6 385 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 SMNDC1O75940 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDGFB-202ENST00000381551 CLDN14O95500 239 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 BCL10O95999 233 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 TP53P04637 393 aaPredicted RBP13.69□□□□□ -0.22
PDGFB-202ENST00000381551 RPL4P36578 427 aaKnown RBP13.69□□□□□ -0.22
PDGFB-202ENST00000381551 SELENOPP49908 381 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 DAPP51397 102 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 TAF11Q15544 211 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 ACKR1Q16570 336 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 ARMC4Q5T2S8 1044 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF474Q6S9Z5 364 aaPredicted RBP13.69□□□□□ -0.22
PDGFB-202ENST00000381551 KLHL17Q6TDP4 642 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 TFAP2EQ6VUC0 442 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.69□□□□□ -0.22
PDGFB-202ENST00000381551 IGFN1Q86VF2 1251 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 WDFY1Q8IWB7 410 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 ATG16L2Q8NAA4 619 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 ICA1LQ8NDH6 482 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 SSC4DQ8WTU2 575 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 APH1AQ96BI3 265 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 GPX7Q96SL4 187 aaPredicted RBP13.69□□□□□ -0.22
PDGFB-202ENST00000381551 EMC6Q9BV81 110 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 GABARAPL1Q9H0R8 117 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 OR52D1Q9H346 318 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 TXNIPQ9H3M7 391 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 EGLN3Q9H6Z9 239 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF556Q9HAH1 456 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 KCNJ16Q9NPI9 418 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 REV1Q9UBZ9 1251 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 IL20RAQ9UHF4 553 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
PDGFB-202ENST00000381551 RCE1Q9Y256 329 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 TENM4Q6N022 2769 aa13.69□□□□□ -0.22
PDGFB-202ENST00000381551 FREM1Q5H8C1 2179 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 SAC3D1A6NKF1 404 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 PDLIM1O00151 329 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 IGHMP01871 453 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 CD14P08571 375 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 IGFBP1P08833 259 aaPredicted RBP13.68□□□□□ -0.22
PDGFB-202ENST00000381551 ANPEPP15144 967 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 BIDP55957 195 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 ERVK-25P63136 954 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 RCN1Q15293 331 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 RPL13AP3Q6NVV1 102 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 NIPAL3Q6P499 406 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 CASP12Q6UXS9 341 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 DPY19L2P2Q6ZN68 376 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 ZNF620Q6ZNG0 422 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 LUZP2Q86TE4 346 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 TMEM123Q8N131 208 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 CLDN22Q8N7P3 220 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 OR6X1Q8NH79 312 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 SAMD8Q96LT4 415 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 ADAD1Q96M93 576 aaKnown RBP13.68□□□□□ -0.22
PDGFB-202ENST00000381551 OR2M2Q96R28 347 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 KATNB1Q9BVA0 655 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 DCLRE1BQ9H816 532 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 SMURF2Q9HAU4 748 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 PRSS50Q9UI38 385 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 CDH10Q9Y6N8 788 aa13.68□□□□□ -0.22
PDGFB-202ENST00000381551 NKX2-6A6NCS4 301 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms