RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 AGTR2P50052 363 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 GAB1Q13480 694 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 SLC46A3Q7Z3Q1 461 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 NAGSQ8N159 534 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 STARD4Q96DR4 205 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 HMCESQ96FZ2 354 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 SAMD8Q96LT4 415 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 LMF2Q9BU23 707 aaKnown RBP8.16□□□□□ -1.1
LIG3-202ENST00000378526 GALPQ9UBC7 116 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 ZNF835Q9Y2P0 537 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 GPR52Q9Y2T5 361 aa8.16□□□□□ -1.1
LIG3-202ENST00000378526 SLIT1O75093 1534 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 A0A0B4J203 849 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 PHF1O43189 567 aaPredicted RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 SLC6A8P48029 635 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 RACK1P63244 317 aaKnown RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 DLX2Q07687 328 aaPredicted RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 C19orf43Q9BQ61 176 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 NMES1Q9C002 83 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 SLC27A5Q9Y2P5 690 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 LIPCP11150 499 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 JUNBP17275 347 aaPredicted RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 BAP18Q8IXM2 172 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 LRRC25Q8N386 305 aaPredicted RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 ZNF383Q8NA42 475 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 NUP37Q8NFH4 326 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 OR5M3Q8NGP4 307 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 ADAMTS18Q8TE60 1221 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 PCNPQ8WW12 178 aaKnown RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 RAB37Q96AX2 223 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 STACQ99469 402 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 ANKRD63C9JTQ0 380 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 DDAH2O95865 285 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 ATP1B1P05026 303 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 OR5G3P0C626 314 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 CEBPBP17676 345 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 HAAOP46952 286 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 ATP1B3P54709 279 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 SSX1Q16384 188 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 ZNF789Q5FWF6 425 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 RNASEKQ6P5S7 137 aaKnown RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 MSLNLQ96KJ4 702 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 TUSC2O75896 110 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 GP2P55259 537 aaKnown RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 MEPCEQ7L2J0 689 aaKnown RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 MRPL21Q7Z2W9 205 aaKnown RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 IL1F10Q8WWZ1 152 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 GPX7Q96SL4 187 aaPredicted RBP8.15□□□□□ -1.1
LIG3-202ENST00000378526 CITED1Q99966 193 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 PLEKHF2Q9H8W4 249 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 P4HTMQ9NXG6 502 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 NFS1Q9Y697 457 aa8.15□□□□□ -1.1
LIG3-202ENST00000378526 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.15□□□□□ -1.11
LIG3-202ENST00000378526 TRAPPC2LH3BP13 241 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 CD82P27701 267 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 CLDN20P56880 219 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 SCARF1Q14162 830 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 SAPCD1Q5SSQ6 148 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 C9orf57Q5W0N0 161 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 OVCH1Q7RTY7 1134 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 LSRQ86X29 649 aaPredicted RBP8.15□□□□□ -1.11
LIG3-202ENST00000378526 NAXDQ8IW45 347 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 OR5AU1Q8NGC0 362 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 LIPHQ8WWY8 451 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 OR5B2Q96R09 309 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 APODP05090 189 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 AGFG1P52594 562 aaKnown RBP8.15□□□□□ -1.11
LIG3-202ENST00000378526 PLPP4Q5VZY2 271 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 SLC5A8Q8N695 610 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 SLC38A9Q8NBW4 561 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 NETO1Q8TDF5 533 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 FYTTD1Q96QD9 318 aaKnown RBP8.15□□□□□ -1.11
LIG3-202ENST00000378526 ISCA1Q9BUE6 129 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 SIRT7Q9NRC8 400 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 BOLA1Q9Y3E2 137 aa8.15□□□□□ -1.11
LIG3-202ENST00000378526 TCRBV3S1A0A5B6 114 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 KLRC4O43908 158 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 OR2J3O76001 311 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 MS4A2Q01362 244 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 RPEL1Q2QD12 228 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 ZNF805Q5CZA5 627 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 TMEM251Q8N6I4 163 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 SLC35G3Q8N808 338 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 OR9A1PQ8NGU1 263 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 KCTD13Q8WZ19 329 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 RPUSD4Q96CM3 377 aaKnown RBP8.14□□□□□ -1.11
LIG3-202ENST00000378526 NAT8BQ9UHF3 227 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 ZNF816-ZNF321PA0A0X1KG74 233 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 ZNF354AO60765 605 aaPredicted RBP8.14□□□□□ -1.11
LIG3-202ENST00000378526 SEMA4FO95754 770 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 GABRA3P34903 492 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 CPOXP36551 454 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 DCTP40126 519 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 FAM182AQ5T1J6 154 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 ZNF322Q6U7Q0 402 aaPredicted RBP8.14□□□□□ -1.11
LIG3-202ENST00000378526 SLC16A13Q7RTY0 426 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 MKXQ8IYA7 352 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 ADGRG5Q8IZF4 528 aa8.14□□□□□ -1.11
LIG3-202ENST00000378526 CFAP52Q8N1V2 620 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms