RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TRAT1Q6PIZ9 186 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 DOK3Q7L591 496 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 C15orf54Q8N8G6 183 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 GPX7Q96SL4 187 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 UTP23Q9BRU9 249 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 DAPP1Q9UN19 280 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CHURC1-FNTBB4DL54 471 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ICMTO60725 284 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 LSM6P62312 80 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FOXO1Q12778 655 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 C14orf28Q4W4Y0 310 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 PLBD1Q6P4A8 553 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SLC16A12Q6ZSM3 486 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SLC35D2Q76EJ3 337 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF614Q8N883 585 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FPGSQ05932 587 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CDK5R1Q15078 307 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 BEND4Q6ZU67 534 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ADPRHL1Q8NDY3 354 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SLC25A36Q96CQ1 311 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 GDNFP39905 211 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 AKR1C8PQ5T2L2 129 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FAM219AQ8IW50 185 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ELSPBP1Q96BH3 223 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM41AQ96HV5 264 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 LPAR4Q99677 370 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ZBTB20Q9HC78 741 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 GLRX2Q9NS18 164 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 PQLC2LA1A4F0 135 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SLC17A2O00624 439 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 NDUFB7P17568 137 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 JAGN1Q8N5M9 183 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CLRN3Q8NCR9 226 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SDF2Q99470 211 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 RANGRFQ9HD47 186 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 TIMM10BQ9Y5J6 103 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 A0A0J9YY10 115 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 DEFA5Q01523 94 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FCRLBQ6BAA4 426 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 Q6ZTK2 550 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FAM160A2Q8N612 972 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 APOOQ9BUR5 198 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SF3B5Q9BWJ5 86 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 OR10A4Q9H209 315 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CREBZFQ9NS37 354 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SLC17A4Q9Y2C5 497 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 MAOBP27338 520 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 HERV-K104P61576 105 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 MGAT3Q09327 533 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 VTCN1Q7Z7D3 282 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 MCATQ8IVS2 390 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 OR51G2Q8NGK0 314 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 POC1BQ8TC44 478 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 STRADBQ9C0K7 418 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 DUX1O43812 170 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FIGNL1Q6PIW4 674 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 NANOS1Q8WY41 292 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FAM46AQ96IP4 442 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 WDR83Q9BRX9 315 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SLC2A8Q9NY64 477 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CCDC163A0A0D9SF12 145 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FUT7Q11130 342 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF350Q9GZX5 532 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 NPIPB15A6NHN6 443 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 K7EPK0 472 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 RHOP08100 348 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 OR8U1Q8NH10 309 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CAPNS2Q96L46 248 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 Q96M85 177 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 C6P13671 934 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 MMP11P24347 488 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 BCL2L15Q5TBC7 163 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF573Q86YE8 665 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 RBM14Q96PK6 669 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 AKR1C4P17516 323 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 FAM3AP98173 230 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF770Q6IQ21 691 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 PRTFDC1Q9NRG1 225 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CBY1Q9Y3M2 126 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ARR3P36575 388 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 HAGHQ16775 308 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 MTURNQ8N3F0 131 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SLC34A2O95436 690 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 MMP7P09237 267 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 POU3F4P49335 361 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 OR8B8Q15620 311 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 TRNP1Q6NT89 227 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 GOLGA2P5Q9HBQ8 144 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CNMDO75829 334 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 GJB5O95377 273 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 GPX8Q8TED1 209 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ARRDC3Q96B67 414 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SENP5Q96HI0 755 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 TXNIPQ9H3M7 391 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CUTCQ9NTM9 273 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 GABREP78334 506 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 NSDHLQ15738 373 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ZMAT5Q9UDW3 170 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 YTHDF2Q9Y5A9 579 aaKnown RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 KCNAB3O43448 404 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms