RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TRAF3IP2O43734 574 aaPredicted RBP18.27■□□□□ 0.52
VSX1-201ENST00000376707 IGHV4-31P0DP07 118 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 CALCRP30988 508 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 CAPZA2P47755 286 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 IDH3GP51553 393 aaPredicted RBP18.27■□□□□ 0.52
VSX1-201ENST00000376707 GGTLC2Q14390 218 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 OR1Q1Q15612 314 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 EFNB3Q15768 340 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 RANBP3LQ86VV4 465 aaPredicted RBP18.27■□□□□ 0.52
VSX1-201ENST00000376707 TMEM123Q8N131 208 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 ANKS4BQ8N8V4 417 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 OR6S1Q8NH40 331 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 ASPNQ9BXN1 380 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 CORINQ9Y5Q5 1042 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 FBN1P35555 2871 aaKnown RBP18.26■□□□□ 0.51
VSX1-201ENST00000376707 A0A087WUJ7 227 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 A0A0B4J2E0 115 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 A0A1B0GX12 115 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 RNF212BA8MTL3 300 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 VSTM5A8MXK1 200 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 M0R3G1 203 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 TPST2O60704 377 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 CELA3BP08861 270 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 FAM157CP0CG43 387 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 ZNF16P17020 682 aaPredicted RBP18.26■□□□□ 0.51
VSX1-201ENST00000376707 ARR3P36575 388 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 NPRL3Q12980 569 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 SELPLGQ14242 412 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 CARD17Q5XLA6 110 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 CCDC36Q8IYA8 594 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 C10orf53Q8N6V4 93 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 NUP37Q8NFH4 326 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 ZNF837Q96EG3 531 aaPredicted RBP18.26■□□□□ 0.51
VSX1-201ENST00000376707 WFDC6Q9BQY6 131 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 BEX2Q9BXY8 128 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 PLK3Q9H4B4 646 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 KAT8Q9H7Z6 458 aaKnown RBP18.26■□□□□ 0.51
VSX1-201ENST00000376707 MYOZ1Q9NP98 299 aaPredicted RBP18.26■□□□□ 0.51
VSX1-201ENST00000376707 TMEM160Q9NX00 188 aa18.26■□□□□ 0.51
VSX1-201ENST00000376707 ZNF99A8MXY4 864 aaPredicted RBP18.25■□□□□ 0.51
VSX1-201ENST00000376707 VWC2LB2RUY7 222 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 MS4A18H0YCH9 400 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 SEC14L2O76054 403 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 HPRP00739 348 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 C8BP07358 591 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 NR4A2P43354 598 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 GZMKP49863 264 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 MTPNP58546 118 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 POU3F1Q03052 451 aaPredicted RBP18.25■□□□□ 0.51
VSX1-201ENST00000376707 HGFACQ04756 655 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 PMS2P3Q13401 168 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 CYP51A1Q16850 503 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 MS4A18Q3C1V0 323 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 SWT1Q5T5J6 900 aaKnown RBP18.25■□□□□ 0.51
VSX1-201ENST00000376707 MYPOPQ86VE0 399 aaPredicted RBP18.25■□□□□ 0.51
VSX1-201ENST00000376707 SCAIQ8N9R8 606 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 SLC41A3Q96GZ6 507 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 EMC6Q9BV81 110 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 ZNF442Q9H7R0 627 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 B3GAT2Q9NPZ5 323 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 FBXO9Q9UK97 447 aaPredicted RBP18.25■□□□□ 0.51
VSX1-201ENST00000376707 USP22Q9UPT9 525 aa18.25■□□□□ 0.51
VSX1-201ENST00000376707 COL6A5A8TX70 2615 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 LOC390937A0A1W2PQ73 354 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 FMO6PO60774 539 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 BGLAPP02818 100 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 HLA-DOBP13765 273 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 NPR2P20594 1047 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 THBS4P35443 961 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 PPOXP50336 477 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 CDH12P55289 794 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 NFYCQ13952 458 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 MDP1Q86V88 176 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 SLC30A8Q8IWU4 369 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 C20orf196Q8IYI0 205 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 SMYD1Q8NB12 490 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 FOXN4Q96NZ1 517 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 ARHGDIGQ99819 225 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 RAB1BQ9H0U4 201 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 LPAR3Q9UBY5 353 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 NOX1Q9Y5S8 564 aa18.24■□□□□ 0.51
VSX1-201ENST00000376707 IGHV2OR16-5A0A0B4J2B6 119 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 ZNF503-AS2A6NEH8 195 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 hCG_2039718K7EN88 272 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 ERCC1P07992 297 aaPredicted RBP18.23■□□□□ 0.51
VSX1-201ENST00000376707 PUDPQ08623 228 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 DUSP7Q16829 419 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 IQCCQ4KMZ1 466 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 PHYHD1Q5SRE7 291 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 SPATA21Q7Z572 469 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 IL17RDQ8NFM7 739 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 LRR1Q96L50 414 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 MOGAT1Q96PD6 335 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 MCHR1Q99705 422 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 TMEM43Q9BTV4 400 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 REPIN1Q9BWE0 567 aaKnown RBP18.23■□□□□ 0.51
VSX1-201ENST00000376707 TMEM120AQ9BXJ8 343 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 SHARPINQ9H0F6 387 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 MRGBPQ9NV56 204 aa18.23■□□□□ 0.51
VSX1-201ENST00000376707 MED29Q9NX70 200 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms