RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 M1APQ8TC57 530 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 PHOSPHO1Q8TCT1 267 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SNAPC3Q92966 411 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 MOAP1Q96BY2 351 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 KLHDC7BQ96G42 594 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 CELF6Q96J87 481 aaKnown RBP8.2□□□□□ -1.1
UBR4-201ENST00000375218 C1QTNF2Q9BXJ5 285 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 KIR3DX1Q9H7L2 352 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 PSORS1C1Q9UIG5 152 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 C2orf16Q68DN1 1984 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 OR6C68A6NDL8 312 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 H0YGN5 161 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 NRP1O14786 923 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 NBR2O15453 112 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 DDTP30046 118 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 FIGNL1Q6PIW4 674 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 FCRLAQ7L513 359 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 MUC20Q8N307 709 aaPredicted RBP8.2□□□□□ -1.1
UBR4-201ENST00000375218 CLDN22Q8N7P3 220 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 NTNG2Q96CW9 530 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 PKMYT1Q99640 499 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 TMEM27Q9HBJ8 222 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 ARL15Q9NXU5 204 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SNX12Q9UMY4 172 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 NUP205Q92621 2012 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 A0A1B0GUS0 222 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 HACD1B0YJ81 288 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 RLN2P04090 185 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 SMIM10L1P0DMW3 83 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 OTX1P32242 354 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 GSK3BP49841 420 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 ID2Q02363 134 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 RFTN2Q52LD8 501 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 SYCE2Q6PIF2 218 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 KYAT3Q6YP21 454 aaKnown RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.19□□□□□ -1.1
UBR4-201ENST00000375218 PRICKLE2Q7Z3G6 844 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 GPSM1Q86YR5 675 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 C12orf43Q96C57 262 aaKnown RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 TIMD4Q96H15 378 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 SMIM10Q96HG1 83 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 GPA33Q99795 319 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 DPH1Q9BZG8 443 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 INPP5EQ9NRR6 644 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 GNPTGQ9UJJ9 305 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 BHLHE40O14503 412 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 SLC25A12O75746 678 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 CLDN7O95471 211 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 GOT2P00505 430 aaKnown RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 HTR1AP08908 422 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 ZNF250P15622 560 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 ITGA3P26006 1051 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 MAGOHP61326 146 aaKnown RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 RPL32P62910 135 aaKnown RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 ARSIQ5FYB1 569 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 SATL1Q86VE3 508 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 TMEM251Q8N6I4 163 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 ZNF512Q96ME7 567 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 PEBP4Q96S96 227 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 COPS8Q99627 209 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 RAB11FIP5Q9BXF6 653 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 ING4Q9UNL4 249 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 HEMK1Q9Y5R4 338 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 SHISA7A6NL88 538 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 ZNF217O75362 1048 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 CA11O75493 328 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 P04436 131 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 GTF2F2P13984 249 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 MUC1P15941 1255 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 EIF4EBP2Q13542 120 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 CRB2Q5IJ48 1285 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 IGFN1Q86VF2 1251 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 OR52I1Q8NGK6 324 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 OR6M1Q8NGM8 313 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 ASB17Q8WXJ9 295 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 DLG3Q92796 817 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 SENP5Q96HI0 755 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 CUTCQ9NTM9 273 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 OR14J1Q9UGF5 321 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 ZFHX3Q15911 3703 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 HELZP42694 1942 aaKnown RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 MBD3L4A6NDZ8 208 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 MBD3L3A6NE82 208 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 SULT1C4O75897 302 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 MPIG6BO95866 241 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 PDZD11Q5EBL8 140 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 FBXW9Q5XUX1 488 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 VASNQ6EMK4 673 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 RSPO2Q6UXX9 243 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 FAM214BQ7L5A3 538 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 SYS1Q8N2H4 156 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 C12orf45Q8N5I9 185 aaPredicted RBP8.19□□□□□ -1.1
UBR4-201ENST00000375218 METTL13Q8N6R0 699 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 OR51S1Q8NGJ8 323 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 OR2T11Q8NH01 316 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 COQ8AQ8NI60 647 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 VSTM2LQ96N03 204 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 C1orf50Q9BV19 199 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 C14orf105Q9NVL8 296 aa8.19□□□□□ -1.1
UBR4-201ENST00000375218 RNF115Q9Y4L5 304 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms