RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 KITP10721 976 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 CD79AP11912 226 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 BMP2P12643 396 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF35P13682 527 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF14P17017 642 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-202ENST00000374426 TCN1P20061 433 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-202ENST00000374426 PCMT1P22061 227 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 CBLP22681 906 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 CFPP27918 469 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 RUNX1T1Q06455 604 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 PIGFQ07326 219 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 GSG1Q2KHT4 349 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 MS4A18Q3C1V0 323 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 C6orf10Q5SRN2 563 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 NXNQ6DKJ4 435 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 C5orf46Q6UWT4 87 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 NHLRC1Q6VVB1 395 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 DEF8Q6ZN54 512 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 MSANTD1Q6ZTZ1 278 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF627Q7L945 461 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 NET1Q7Z628 596 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-202ENST00000374426 WDFY1Q8IWB7 410 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 LSMEM1Q8N8F7 131 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 ADPRHL1Q8NDY3 354 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 SEMA6DQ8NFY4 1073 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 OR9I1Q8NGQ6 314 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 CLDND2Q8NHS1 167 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 SLC38A4Q969I6 547 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 ZBTB9Q96C00 473 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 SLC41A3Q96GZ6 507 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 MAELQ96JY0 434 aaKnown RBP11.86□□□□□ -0.51
CXCL12-202ENST00000374426 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 EMC6Q9BV81 110 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 RACGAP1Q9H0H5 632 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 METTL17Q9H7H0 456 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-202ENST00000374426 RMND5AQ9H871 391 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 THAP1Q9NVV9 213 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF224Q9NZL3 707 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 ZIM2Q9NZV7 527 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 KLHL14Q9P2G3 628 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 RPS6KB2Q9UBS0 482 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 REV1Q9UBZ9 1251 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 TRAV36DV7A0A075B6V5 113 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 FAM157AC9JC47 383 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 WNT9BO14905 357 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 COL8A2P25067 703 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 PRKAR1BP31321 381 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 GLRXP35754 106 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 ALDH3B1P43353 468 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 SEC24CP53992 1094 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 AQP5P55064 265 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 WDR4P57081 412 aaKnown RBP11.85□□□□□ -0.51
CXCL12-202ENST00000374426 SLC9B1Q4ZJI4 515 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 ALG10BQ5I7T1 473 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 C12orf54Q6X4T0 127 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF813Q6ZN06 617 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 MAVSQ7Z434 540 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 GLCCI1Q86VQ1 547 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 LRP11Q86VZ4 500 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 UEVLDQ8IX04 471 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 BBS10Q8TAM1 723 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 GTF2H4Q92759 462 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 TMEM186Q96B77 213 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 TXNDC15Q96J42 360 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 LRR1Q96L50 414 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 PLA2G12AQ9BZM1 189 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 PAIP1Q9H074 479 aaKnown RBP11.85□□□□□ -0.51
CXCL12-202ENST00000374426 CENPHQ9H3R5 247 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 MS4A5Q9H3V2 200 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 NARFLQ9H6Q4 476 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 HIF1ANQ9NWT6 349 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 MED29Q9NX70 200 aa11.85□□□□□ -0.51
CXCL12-202ENST00000374426 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
CXCL12-202ENST00000374426 A0A087WUJ7 227 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 A0A0A6YYJ9 748 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 SLCO1B7G3V0H7 640 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 CLIC1O00299 241 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 ETS2P15036 469 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 B4GALT1P15291 398 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 NQO1P15559 274 aaKnown RBP11.84□□□□□ -0.51
CXCL12-202ENST00000374426 HOXB9P17482 250 aaPredicted RBP11.84□□□□□ -0.51
CXCL12-202ENST00000374426 GPR6P46095 362 aaPredicted RBP11.84□□□□□ -0.51
CXCL12-202ENST00000374426 GIPRP48546 466 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 POLR2JP52435 117 aaKnown RBP11.84□□□□□ -0.51
CXCL12-202ENST00000374426 FADDQ13158 208 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 MFSD13AQ14CX5 517 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 MAD2L1BPQ15013 274 aaPredicted RBP11.84□□□□□ -0.51
CXCL12-202ENST00000374426 FXNQ16595 210 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 TRMT5Q32P41 509 aaKnown RBP11.84□□□□□ -0.51
CXCL12-202ENST00000374426 HHATQ5VTY9 493 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 ANKRD42Q8N9B4 389 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 ZFAND2BQ8WV99 257 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 DNAJA4Q8WW22 397 aaPredicted RBP11.84□□□□□ -0.51
CXCL12-202ENST00000374426 RDH5Q92781 318 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 OR52B2Q96RD2 323 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 LPAR2Q9HBW0 351 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 FZR1Q9UM11 496 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
CXCL12-202ENST00000374426 CORINQ9Y5Q5 1042 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms