RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RCVRNP35243 200 aa14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 RNF4P78317 190 aa14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 SLC35D3Q5M8T2 416 aa14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 LYSMD4Q5XG99 296 aa14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 KRT74Q7RTS7 529 aa14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 EXD3Q8N9H8 876 aa14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 RNF166Q96A37 237 aaPredicted RBP14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 UPRTQ96BW1 309 aa14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 LRFN5Q96NI6 719 aa14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 FYTTD1Q96QD9 318 aaKnown RBP14.48□□□□□ -0.09
CNKSR1-202ENST00000374253 NUP210LQ5VU65 1888 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 IDH3BO43837 385 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 HLA-DQA2P01906 255 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 BGLAPP02818 100 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 ADRB1P08588 477 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 PRKAR1AP10644 381 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 EPXP11678 715 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 DCAF7P61962 342 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 CD83Q01151 205 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 HSD17B12Q53GQ0 312 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 LIPNQ5VXI9 398 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 METAP1DQ6UB28 335 aaPredicted RBP14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 TRILQ7L0X0 811 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 TPRA1Q86W33 373 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 CHAC2Q8WUX2 184 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 THEM6Q8WUY1 208 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 GCDHQ92947 438 aaPredicted RBP14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 ST6GAL2Q96JF0 529 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 AMELYQ99218 206 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 THAP7Q9BT49 309 aaPredicted RBP14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 RBFOX1Q9NWB1 397 aaKnown RBP14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 MRM2Q9UI43 246 aaKnown RBP14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 ADAMTS20P59510 1910 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 TMED7-TICAM2A0A0A6YYA0 188 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 HEXBP07686 556 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 FREM3P0C091 2139 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 PGCP20142 388 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 SLC6A8P48029 635 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 AGFG1P52594 562 aaKnown RBP14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 MELKQ14680 651 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 ETFDHQ16134 617 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 TATDN3Q17R31 274 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 LCN10Q6JVE6 187 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 TMEM71Q6P5X7 295 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 SLC35D2Q76EJ3 337 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 GPR119Q8TDV5 335 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 ATOH1Q92858 354 aaPredicted RBP14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 TTYH2Q9BSA4 534 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 PTDSS2Q9BVG9 487 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 ULBP3Q9BZM4 244 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 RANGRFQ9HD47 186 aaPredicted RBP14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 VDAC3Q9Y277 283 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 TMED7Q9Y3B3 224 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 BOLA1Q9Y3E2 137 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 N6AMT1Q9Y5N5 214 aa14.47□□□□□ -0.09
CNKSR1-202ENST00000374253 ADAMTS9Q9P2N4 1935 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 RAD1O60671 282 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 SCRG1O75711 98 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 HLA-DQB1P01920 261 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 CD3GP09693 182 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 NPR2P20594 1047 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 EPHA8P29322 1005 aaPredicted RBP14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 PITPNBP48739 271 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 CBFBQ13951 182 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 COL28A1Q2UY09 1125 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 NKAIN1Q4KMZ8 207 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 NCCRP1Q6ZVX7 275 aaPredicted RBP14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 PRSS45Q7RTY3 260 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 ADGRG3Q86Y34 549 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 TIGD4Q8IY51 512 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 ZNF441Q8N8Z8 693 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 APCDD1LQ8NCL9 501 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 OR8K3Q8NH51 312 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 ZNF671Q8TAW3 534 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 LIPHQ8WWY8 451 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 PIGKQ92643 395 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 FKRPQ9H9S5 495 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 SEMA5BQ9P283 1151 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 LAMP5Q9UJQ1 280 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 HRH3Q9Y5N1 445 aa14.46□□□□□ -0.09
CNKSR1-202ENST00000374253 LY6G6EA0A0G2JKS1 128 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 FADS1O60427 444 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 SERPINA3P01011 423 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 UCHL1P09936 223 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 PNLIPRP2P54317 469 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 ISXQ2M1V0 245 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 SLC6A19Q695T7 634 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 RHBDD2Q6NTF9 364 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 SLC16A9Q7RTY1 509 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 OR10AC1Q8NH08 325 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 MAFAQ8NHW3 353 aaPredicted RBP14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 LGALS14Q8TCE9 139 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 METTL21AQ8WXB1 218 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 GFI1Q99684 422 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 KCNG2Q9UJ96 466 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 NPFFR2Q9Y5X5 522 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 U3KQA8 63 aa14.46□□□□□ -0.1
CNKSR1-202ENST00000374253 TRAV36DV7A0A075B6V5 113 aa14.45□□□□□ -0.1
CNKSR1-202ENST00000374253 TMEM221A6NGB7 291 aa14.45□□□□□ -0.1
CNKSR1-202ENST00000374253 NOTOA8MTQ0 251 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms