RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 RPL4P36578 427 aaKnown RBP11.32□□□□□ -0.6
PRPF4-202ENST00000374199 TEX30Q5JUR7 227 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 FAM205BPQ63HN1 556 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 NDUFAF7Q7L592 441 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 OR11G2Q8NGC1 345 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 OR10G3Q8NGC4 313 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 C1GALT1C1Q96EU7 318 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 TTYH2Q9BSA4 534 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 C6orf62Q9GZU0 229 aaPredicted RBP11.32□□□□□ -0.6
PRPF4-202ENST00000374199 NUAK2Q9H093 628 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 GALNT9Q9HCQ5 603 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 INIPQ9NRY2 104 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 SNTG1Q9NSN8 517 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 EML6Q6ZMW3 1958 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 PRSS37A4D1T9 235 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 GPRIN2O60269 458 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 GATBO75879 557 aaKnown RBP11.32□□□□□ -0.6
PRPF4-202ENST00000374199 PTTG1O95997 202 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 CD37P11049 281 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 CCR4P51679 360 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 SIRPAP78324 504 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 ROM1Q03395 351 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 INSL4Q14641 139 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 ARSKQ6UWY0 536 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 PPP1R32Q7Z5V6 425 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 LAX1Q8IWV1 398 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 SETD6Q8TBK2 473 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 ASB10Q8WXI3 467 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 AP3S1Q92572 193 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 TMEM203Q969S6 136 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 ULBP3Q9BZM4 244 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 PPP1R3EQ9H7J1 279 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 GALNT8Q9NY28 637 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 B3GAT1Q9P2W7 334 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 GRHPRQ9UBQ7 328 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 KLHDC2Q9Y2U9 406 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 ASCC3Q8N3C0 2202 aaKnown RBP11.32□□□□□ -0.6
PRPF4-202ENST00000374199 A0A087WZY1 265 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 BLOC1S5-TXNDC5H3BN57 136 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 SRSF10O75494 262 aaKnown RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 MRPL3P09001 348 aaKnown RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 ZNF806P0C7X5 589 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 S100A5P33763 92 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 MLF1P58340 268 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 HNRNPA0Q13151 305 aaKnown RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 WDFY1Q8IWB7 410 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 OR2T4Q8NH00 348 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 ACOT12Q8WYK0 555 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 SLC39A1Q9NY26 324 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 BDP1A6H8Y1 2624 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 KLK3P07288 261 aaPredicted RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 ALOX5APP20292 161 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 GRPRP30550 384 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 FOXF1Q12946 379 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 NEIL3Q8TAT5 605 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 DEPDC7Q96QD5 511 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 KCNK17Q96T54 332 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 TMED9Q9BVK6 235 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 SMOC1Q9H4F8 434 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 SDHAF3Q9NRP4 125 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 ALKBH4Q9NXW9 302 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 MRM2Q9UI43 246 aaKnown RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 TRBV5-5A0A0J9YX44 114 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 F13BP05160 661 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 BLVRAP53004 296 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 ACKR1Q16570 336 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 HIST3H3Q16695 136 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 HBMQ6B0K9 141 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 FAM199XQ6PEV8 388 aaPredicted RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 ASB18Q6ZVZ8 466 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 GLRX5Q86SX6 157 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 JAZF1Q86VZ6 243 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 SMAP2Q8WU79 429 aaPredicted RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 RGP1Q92546 391 aaPredicted RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 ZBTB8AQ96BR9 441 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 GTPBP2Q9BX10 602 aaKnown RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 HDHD5Q9BXW7 423 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 MRPL13Q9BYD1 178 aaKnown RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 RPRD1BQ9NQG5 326 aaKnown RBP11.31□□□□□ -0.6
PRPF4-202ENST00000374199 TBC1D24Q9ULP9 559 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 PCDHGA1Q9Y5H4 931 aa11.31□□□□□ -0.6
PRPF4-202ENST00000374199 SLC22A23A1A5C7 686 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 PHYHO14832 338 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 MAGEB3O15480 346 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 APEX1P27695 318 aaKnown RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 HCCSP53701 268 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 PPP3R1P63098 170 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 AGAP7PQ5VUJ5 663 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 XKRXQ6PP77 449 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 PAMR1Q6UXH9 720 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 NAXDQ8IW45 347 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 TAAR9Q96RI9 348 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 CMKLR1Q99788 373 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 MRPL22Q9NWU5 206 aaKnown RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 ANKRD10Q9NXR5 420 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 B9D1Q9UPM9 204 aa11.3□□□□□ -0.6
PRPF4-202ENST00000374199 TRIM3O75382 744 aaPredicted RBP11.3□□□□□ -0.6
PRPF4-202ENST00000374199 ATP6V1E1P36543 226 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms