RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 NUDT14O95848 222 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 LALBAP00709 142 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 FBXO45P0C2W1 286 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 PRKCAP17252 672 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 SRMP19623 302 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 TGFBR1P36897 503 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 AQP2P41181 271 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 MMP15P51511 669 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF41P51814 821 aaPredicted RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 BTG1P62324 171 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ERVK-25P63136 954 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 DAB2P98082 770 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 MXD1Q05195 221 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ZFP36L1Q07352 338 aaKnown RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 DYRK1AQ13627 763 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF79Q15937 498 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 NTRK2Q16620 822 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 Q499Y3 187 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 PYDC2Q56P42 97 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 LINC01590Q5TEZ4 76 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC22A10Q63ZE4 541 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 TIGD3Q6B0B8 471 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 VASNQ6EMK4 673 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC18B1Q6NT16 456 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 PAPD4Q6PIY7 484 aaKnown RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ARL9Q6T311 187 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 PLET1Q6UQ28 207 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 CBLN3Q6UW01 205 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 APOOLQ6UXV4 268 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 DBX2Q6ZNG2 339 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 H1FNTQ75WM6 255 aaPredicted RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 COX15Q7KZN9 410 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 GDPD3Q7L5L3 318 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 BTLAQ7Z6A9 289 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 C1orf210Q8IVY1 113 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 LAX1Q8IWV1 398 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 TIGD4Q8IY51 512 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 RDH10Q8IZV5 341 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 CADM3Q8N126 398 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 TMEM99Q8N816 258 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 LSM14AQ8ND56 463 aaKnown RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 CCDC54Q8NEL0 328 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 SDR9C7Q8NEX9 313 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 GPR148Q8TDV2 347 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 NSMAFQ92636 917 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 HGDQ93099 445 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 CREB3L1Q96BA8 519 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 PELI1Q96FA3 418 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 TRMT61AQ96FX7 289 aaKnown RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ADAD1Q96M93 576 aaKnown RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 NUDT22Q9BRQ3 303 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 MIXL1Q9H2W2 232 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 RNF167Q9H6Y7 350 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 GAREM1Q9H706 876 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ISG20L2Q9H9L3 353 aaKnown RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC17A5Q9NRA2 495 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 SACM1LQ9NTJ5 587 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ALKBH4Q9NXW9 302 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 MYOTQ9UBF9 498 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 COMMD3Q9UBI1 195 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 ZMIZ1Q9ULJ6 1067 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 CAMK2AQ9UQM7 478 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 RPH3AQ9Y2J0 694 aaPredicted RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 HDGFL3Q9Y3E1 203 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 hCG_2014768A0A024R1R8 64 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 A0A0A6YYH2 397 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 TEX13CA0A0J9YWL9 993 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 CPED1A4D0V7 1026 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 A6NJ64 397 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 A8MU76 341 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 LINC01387J3KSC0 135 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 AIPO00170 330 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 PLPP3O14495 311 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 MAGEB3O15480 346 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ARHGEF9O43307 516 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 TLX3O43711 291 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ORC5O43913 435 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 EIF1BO60739 113 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC43A1O75387 559 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 NTN1O95631 604 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 CD2P06729 351 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 DCNP07585 359 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 GSTT2BP0CG30 244 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 EPXP11678 715 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ALOX5APP20292 161 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ACP1P24666 158 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 EDNRAP25101 427 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 CDKN2AP42771 156 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 OR12D2P58182 307 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 CCL7P80098 99 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 SSBP1Q04837 148 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 PUDPQ08623 228 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 EIF3IQ13347 325 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ALKBH1Q13686 389 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 IL18Q14116 193 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 PCK2Q16822 640 aa7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF517Q6ZMY9 492 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF574Q6ZN55 896 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-202ENST00000373720 MARCH3Q86UD3 253 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms