RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CTU2Q2VPK5 515 aaKnown RBP13.16□□□□□ -0.3
LMX1B-202ENST00000373474 NANOGP1Q8N7R0 232 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 OR52N1Q8NH53 320 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 LGALS14Q8TCE9 139 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 SENP5Q96HI0 755 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-202ENST00000373474 CMSS1Q9BQ75 279 aaKnown RBP13.16□□□□□ -0.3
LMX1B-202ENST00000373474 SLC39A9Q9NUM3 307 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 TMEM269A0A1B0GVZ9 245 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 CBY3A6NI87 242 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 UBL3O95164 117 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 MBP02144 154 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 GABRR1P24046 479 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 ACSM1Q08AH1 577 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 PDZK1IP1Q13113 114 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 ZMAT1Q5H9K5 638 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 TMEM31Q5JXX7 168 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 GHSRQ92847 366 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 PKMYT1Q99640 499 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 HIF1ANQ9NWT6 349 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 OSGIN1Q9UJX0 560 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
LMX1B-202ENST00000373474 SULT2B1O00204 365 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 CSNK1A1P48729 337 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 FOXK2Q01167 660 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 TNK1Q13470 666 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 COTL1Q14019 142 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 LTB4RQ15722 352 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 TIGD3Q6B0B8 471 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 BCDIN3DQ7Z5W3 292 aaKnown RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 C1QTNF3Q9BXJ4 246 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 HIPK2Q9H2X6 1198 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 TAAR2Q9P1P5 351 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 ZNF230Q9UIE0 474 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 HRH3Q9Y5N1 445 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 SOCS6O14544 535 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 CA3P07451 260 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 GP2P55259 537 aaKnown RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 RPS15P62841 145 aaKnown RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 EBPQ15125 230 aaKnown RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 HYAL4Q2M3T9 481 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 TMEM52BQ4KMG9 183 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 SFRP5Q5T4F7 317 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 LPCAT3Q6P1A2 487 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 ABHD12BQ7Z5M8 362 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 RADILQ96JH8 1075 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 FOXN4Q96NZ1 517 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 HCAR1Q9BXC0 346 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 SIPA1L3O60292 1781 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 LIPCP11150 499 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 NPPBP16860 134 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 MAOBP27338 520 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 OTX2P32243 289 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 RANP62826 216 aaKnown RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 PLGLAQ15195 96 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 SLC43A2Q8N370 569 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 HPSE2Q8WWQ2 592 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 RSPRY1Q96DX4 576 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 GABARAPL3Q9BY60 117 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 FAM155AB1AL88 458 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 PRICKLE3O43900 615 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-202ENST00000373474 C1QBP02746 253 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 TCRBP04435 133 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 ECI1P42126 302 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 TNFRSF4P43489 277 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 EID2Q8N6I1 236 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 TCTN2Q96GX1 697 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 GALNT9Q9HCQ5 603 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 CCL26Q9Y258 94 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 USP54Q70EL1 1684 aa13.15□□□□□ -0.3
LMX1B-202ENST00000373474 KLK8O60259 260 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 F13BP05160 661 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 SRYQ05066 204 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 MZT1Q08AG7 82 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 GPR176Q14439 515 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 FCN2Q15485 313 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 SAXO2Q658L1 398 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 TMUB2Q71RG4 321 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 ST8SIA4Q92187 359 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 ANKRD9Q96BM1 317 aaPredicted RBP13.15□□□□□ -0.31
LMX1B-202ENST00000373474 HHIPL1Q96JK4 782 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 SEC22CQ9BRL7 303 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 ALG12Q9BV10 488 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 IFT22Q9H7X7 185 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 CLEC2DQ9UHP7 191 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 SRPK3Q9UPE1 567 aa13.15□□□□□ -0.31
LMX1B-202ENST00000373474 F6UZH7 168 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF264O43296 627 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF780AO75290 641 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 PRKRAO75569 313 aaKnown RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 PMS2P2O95744 297 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SLC9A3R2Q15599 337 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 FAM160A2Q8N612 972 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SLCO5A1Q9H2Y9 848 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 CUTCQ9NTM9 273 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 ACOD1A6NK06 481 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 OR8G3PP0DMU2 310 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms