RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 LRRN1Q6UXK5 716 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 SLC36A1Q7Z2H8 476 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 C12orf76Q8N812 135 aaPredicted RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 OR2AK2Q8NG84 335 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 OR51S1Q8NGJ8 323 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 CMTM3Q96MX0 182 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 ICAM5Q9UMF0 924 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 MRPS23Q9Y3D9 190 aaKnown RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 A0A0B4J2E0 115 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 A0A1B0GX12 115 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 HMSDA8MTL9 139 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
USP49-201ENST00000373006 CMPK1P30085 196 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 EMDP50402 254 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 SERTAD2Q14140 314 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 ATXN7L3Q14CW9 347 aaPredicted RBP12.52□□□□□ -0.41
USP49-201ENST00000373006 HSD17B13Q7Z5P4 300 aaPredicted RBP12.52□□□□□ -0.41
USP49-201ENST00000373006 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 RSPRY1Q96DX4 576 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 DPP7Q9UHL4 492 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 EYSQ5T1H1 3165 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 TMEM272A0A1B0GTI8 110 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 CCL5P13501 91 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 MAOBP27338 520 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 DIO1P49895 249 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 FGL1Q08830 312 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 HAGHLQ6PII5 290 aaPredicted RBP12.52□□□□□ -0.41
USP49-201ENST00000373006 GLB1L2Q8IW92 636 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.41
USP49-201ENST00000373006 POMGNT2Q8NAT1 580 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 MIB2Q96AX9 1013 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 MNTQ99583 582 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 GAL3ST1Q99999 423 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 MFRPQ9BY79 579 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 KCNK15Q9H427 330 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 DEC1Q9P2X7 70 aa12.52□□□□□ -0.41
USP49-201ENST00000373006 ZNF230Q9UIE0 474 aaPredicted RBP12.52□□□□□ -0.41
USP49-201ENST00000373006 GPR31O00270 319 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 SULT1B1O43704 296 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 HPP00738 406 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 SPI1P17947 270 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 RPS4Y1P22090 263 aaKnown RBP12.51□□□□□ -0.41
USP49-201ENST00000373006 DDX6P26196 483 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP49-201ENST00000373006 MST1P26927 711 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 CALCRP30988 508 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 TSSK4Q6SA08 328 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 PRSS41Q7RTY9 318 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 LURAP1LQ8IV03 231 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 NAXDQ8IW45 347 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 EID2Q8N6I1 236 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 OR10K1Q8NGX5 313 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 RAB40AQ8WXH6 277 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 SUSD6Q92537 303 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 SMARCD2Q92925 531 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 SERGEFQ9UGK8 458 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 SERTAD3Q9UJW9 196 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 C19orf53Q9UNZ5 99 aaPredicted RBP12.51□□□□□ -0.41
USP49-201ENST00000373006 P2RX6O15547 441 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 NDUFB2O95178 105 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 LDOC1O95751 146 aaPredicted RBP12.51□□□□□ -0.41
USP49-201ENST00000373006 FBXO45P0C2W1 286 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 CT62P0C5K7 136 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 RPS27P42677 84 aaKnown RBP12.51□□□□□ -0.41
USP49-201ENST00000373006 EFNB2P52799 333 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 GMFBP60983 142 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 IL10RAQ13651 578 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 UBXN2BQ14CS0 331 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 PAN3Q58A45 887 aaKnown RBP12.51□□□□□ -0.41
USP49-201ENST00000373006 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 WFIKKN2Q8TEU8 576 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 DUSP19Q8WTR2 217 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 NIT2Q9NQR4 276 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 REV3LO60673 3130 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 TMEM72A0PK05 275 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 FAM25EA8MYX2 175 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 FGF17O60258 216 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 GPRIN2O60269 458 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
USP49-201ENST00000373006 LTBQ06643 244 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 IRF4Q15306 451 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 LRRC37A5PQ49AS3 106 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 ZNF425Q6IV72 752 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 NPEPL1Q8NDH3 523 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 OR4N2Q8NGD1 307 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 OR5T3Q8NGG3 340 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 OR10AC1Q8NH08 325 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 GAL3ST3Q96A11 431 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 PBX4Q9BYU1 374 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 ULBP3Q9BZM4 244 aa12.51□□□□□ -0.41
USP49-201ENST00000373006 TRAV8-7A0A075B6U6 113 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 GLSO94925 669 aaPredicted RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 GTF2F2P13984 249 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 TSFMP43897 325 aaKnown RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 ILF3Q12906 894 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP49-201ENST00000373006 PDSS1Q5T2R2 415 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 OTPQ5XKR4 325 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms