RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 HLA-DOBP13765 273 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 ENPP1P22413 925 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 ADH7P40394 386 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 MTNR1BP49286 362 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 FCRLAQ7L513 359 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 RFT1Q96AA3 541 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 KCNG2Q9UJ96 466 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 FREM3P0C091 2139 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 PATE3B3GLJ2 98 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 G3V3Y1 287 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 IL33O95760 270 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 GP1BBP13224 206 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 FOSL1P15407 271 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 PITPNBP48739 271 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 ACTC1P68032 377 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 ACTA1P68133 377 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 FOXK1P85037 733 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 ASAH1Q13510 395 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 DMKNQ6E0U4 476 aaPredicted RBP10.67□□□□□ -0.7
PDE6C-201ENST00000371447 FAM220AQ7Z4H9 259 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 TSPAN32Q96QS1 320 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 TMEM43Q9BTV4 400 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 EMC6Q9BV81 110 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 WWTR1Q9GZV5 400 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 ST6GALNAC2Q9UJ37 374 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 SIT1Q9Y3P8 196 aa10.67□□□□□ -0.7
PDE6C-201ENST00000371447 TEX51A0A1B0GUA7 166 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 INMT-MINDY4F8WBC2 141 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 H0YC42 278 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 ALOX12BO75342 701 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 HEXBP07686 556 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 GIFP27352 417 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 GPR176Q14439 515 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 MESTQ5EB52 335 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 EID2Q8N6I1 236 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 SMIM19Q96E16 107 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 A0A1B0GX78 115 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 SUSD5O60279 629 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 AGFG1P52594 562 aaKnown RBP10.66□□□□□ -0.7
PDE6C-201ENST00000371447 PRPS1P60891 318 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 ELAVL1Q15717 326 aaKnown RBP10.66□□□□□ -0.7
PDE6C-201ENST00000371447 OR7E24Q6IFN5 339 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 TIGD4Q8IY51 512 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 ST6GAL2Q96JF0 529 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 GTPBP2Q9BX10 602 aaKnown RBP10.66□□□□□ -0.7
PDE6C-201ENST00000371447 ZNF222Q9UK12 451 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 BAIAP2Q9UQB8 552 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 SLC22A13Q9Y226 551 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 GLB1P16278 677 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 IGLV3-21P80748 117 aaPredicted RBP10.66□□□□□ -0.7
PDE6C-201ENST00000371447 NTRK2Q16620 822 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 PWWP2BQ6NUJ5 590 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 CORO6Q6QEF8 472 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 ARSKQ6UWY0 536 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 LINC00114Q6XXX2 140 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 TMPRSS12Q86WS5 348 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 SETD6Q8TBK2 473 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 TSEN15Q8WW01 171 aaKnown RBP10.66□□□□□ -0.7
PDE6C-201ENST00000371447 ADIPOR1Q96A54 375 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 ARL5BQ96KC2 179 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 C5orf34Q96MH7 638 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 TMEM246Q9BRR3 403 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 TCF7L1Q9HCS4 588 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 RBFOX1Q9NWB1 397 aaKnown RBP10.66□□□□□ -0.7
PDE6C-201ENST00000371447 MED29Q9NX70 200 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 ZMAT5Q9UDW3 170 aaKnown RBP10.66□□□□□ -0.7
PDE6C-201ENST00000371447 SUSD2Q9UGT4 822 aa10.66□□□□□ -0.7
PDE6C-201ENST00000371447 FRYQ5TBA9 3013 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 PNMTP11086 282 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 SRMP19623 302 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 FMODQ06828 376 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 OR7A5Q15622 319 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 ACKR1Q16570 336 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.65□□□□□ -0.7
PDE6C-201ENST00000371447 COL28A1Q2UY09 1125 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 BPHLQ86WA6 291 aaPredicted RBP10.65□□□□□ -0.7
PDE6C-201ENST00000371447 TOMM5Q8N4H5 51 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 MS4A15Q8N5U1 240 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 OR14A16Q8NHC5 309 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 ZNF417Q8TAU3 575 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 ZNF587Q96SQ5 575 aaPredicted RBP10.65□□□□□ -0.7
PDE6C-201ENST00000371447 SPOCK3Q9BQ16 436 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 CENPMQ9NSP4 180 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 KLRF1Q9NZS2 232 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 KLHL21Q9UJP4 597 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 MRTO4Q9UKD2 239 aaKnown RBP10.65□□□□□ -0.7
PDE6C-201ENST00000371447 PIN1P1O15428 100 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 RENP00797 406 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 EPXP11678 715 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 THBS2P35442 1172 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 TAS2R43P59537 309 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 ACTA2P62736 377 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 ACTG2P63267 376 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 STPG1Q5TH74 334 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 PRAMEF20Q5VT98 475 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 ZNF574Q6ZN55 896 aaPredicted RBP10.65□□□□□ -0.7
PDE6C-201ENST00000371447 GPAT4Q86UL3 456 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 ITPKCQ96DU7 683 aa10.65□□□□□ -0.7
PDE6C-201ENST00000371447 SEMA4CQ9C0C4 833 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms