RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 EIF2S3LQ2VIR3 472 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 SPIN4Q56A73 249 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 OR4F3Q6IEY1 312 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 FIGNL1Q6PIW4 674 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SLC16A9Q7RTY1 509 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 MYPOPQ86VE0 399 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 GPSM1Q86YR5 675 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 CPNE9Q8IYJ1 553 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 FBXO39Q8N4B4 442 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 MFSD9Q8NBP5 474 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PLA2G15Q8NCC3 412 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 C2CD4CQ8TF44 421 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NAT14Q8WUY8 206 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ZNF480Q8WV37 535 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 RNF133Q8WVZ7 376 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 LHX4Q969G2 390 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 KCNA7Q96RP8 456 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ACOX2Q99424 681 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 RBM38Q9H0Z9 239 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 BCL2L10Q9HD36 194 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 HRASLSQ9HDD0 168 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 KLHL1Q9NR64 748 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NOP53Q9NZM5 478 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 SLC22A13Q9Y226 551 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 GSTK1Q9Y2Q3 226 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 POLDIP2Q9Y2S7 368 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 FER1L5A0AVI2 2057 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ATG2BQ96BY7 2078 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 A0A1B0GUS0 222 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ZNF208O43345 1280 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 SLC25A14O95258 325 aaPredicted RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 APODP05090 189 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ZNF883P0CG24 379 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 IDSP22304 550 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 G0S2P27469 103 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 HLA-DMAP28067 261 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 CRABP1P29762 137 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 KIR3DL1P43629 444 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 PRKAG1P54619 331 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 GAGE1Q13065 139 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 TNXAQ16473 311 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 POM121L1PQ3SYA9 428 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 SLC36A2Q495M3 483 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 FAHD1Q6P587 224 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 C19orf48Q6RUI8 117 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 TMEM108Q6UXF1 575 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 QSOX2Q6ZRP7 698 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 PTAR1Q7Z6K3 402 aaPredicted RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 ZNF554Q86TJ5 538 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 UBALD2Q8IYN6 164 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 PQLC1Q8N2U9 271 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 OR10A7Q8NGE5 316 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 OR2D3Q8NGH3 330 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 OR2A1Q8NGT9 310 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 LRRC20Q8TCA0 184 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ZNF675Q8TD23 568 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 MRGPRDQ8TDS7 321 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 TMEM170AQ8WVE7 144 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 AP2M1Q96CW1 435 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ZNF251Q9BRH9 671 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 PCGF1Q9BSM1 259 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ALG9Q9H6U8 611 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ZNF696Q9H7X3 374 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 NANSQ9NR45 359 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ACSS1Q9NUB1 689 aaPredicted RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 TEX10Q9NXF1 929 aaPredicted RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 SLC2A8Q9NY64 477 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 DEC1Q9P2X7 70 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 SLC23A2Q9UGH3 650 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ASB4Q9Y574 426 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 HEBP2Q9Y5Z4 205 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 IGLV3-12A0A075B6K2 115 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 IGHV1OR15-9A0A0B4J2B8 117 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 NPIPB6E9PJ23 425 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 SLC31A2O15432 143 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 EIF1BO60739 113 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 ADAP1O75689 374 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 CLDN9O95484 217 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 UGT2B4P06133 528 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 JUNBP17275 347 aaPredicted RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 SDC1P18827 310 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 FMO4P31512 558 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 EIF1P41567 113 aaKnown RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 NPBWR2P48146 333 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 AGTR2P50052 363 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 HSD11B2P80365 405 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 MS4A2Q01362 244 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 ROM1Q03395 351 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 PSG5Q15238 335 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 PRTGQ2VWP7 1150 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 LYSMD4Q5XG99 296 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 KIAA0895LQ68EN5 471 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 LCN10Q6JVE6 187 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 FBXO42Q6P3S6 717 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 VWA1Q6PCB0 445 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 TMEM107Q6UX40 140 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 CCDC121Q6ZUS5 278 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 RANBP3LQ86VV4 465 aaPredicted RBP3.5□□□□□ -1.85
MCF2-203ENST00000370576 RNF130Q86XS8 419 aa3.5□□□□□ -1.85
MCF2-203ENST00000370576 GLB1L2Q8IW92 636 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms