RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ING1Q9UK53 422 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 SAMHD1Q9Y3Z3 626 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 FAM32AQ9Y421 112 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 CHCHD2Q9Y6H1 151 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 ANKRD11Q6UB99 2663 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 IGF2RP11717 2491 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 URB1O60287 2271 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 A0A0G2JMM0 328 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 A0A1B0GWA3 101 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 A0A1W2PPB8 328 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 A0A1W2PRS3 328 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 A6NL46 340 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 KIR3DP1A8MWS1 328 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 G3V2T6 193 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 LOC400499M0QZD8 3231 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 EI24O14681 340 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZNF264O43296 627 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 HCRTR2O43614 444 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 GMFGO60234 142 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 HS6ST1O60243 411 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 EIF4E2O60573 245 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 FMO6PO60774 539 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 MITFO75030 526 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZFPL1O95159 310 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 OR5F1O95221 314 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 F10P00742 488 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 H1F0P07305 194 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 CCL3P10147 92 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 HPGDP15428 266 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZNF23P17027 643 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ITGA3P26006 1051 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ELAVL4P26378 380 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 PLA2G5P39877 138 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 HLCSP50747 726 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 DAPP51397 102 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 AQP4P55087 323 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CDC20Q12834 499 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ACACAQ13085 2346 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 RAPSNQ13702 412 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 DGCR6Q14129 220 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZSWIM7Q19AV6 140 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 DEFB109BQ30KR1 87 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 OTUD3Q5T2D3 398 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 OR5M10Q6IEU7 315 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZNF770Q6IQ21 691 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 PODNL1Q6PEZ8 512 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 OPN5Q6U736 354 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 IZUMO2Q6UXV1 221 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 WDR88Q6ZMY6 472 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 PLEKHM3Q6ZWE6 761 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 MDGA2Q7Z553 956 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CYP4Z1Q86W10 505 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ANKRD13BQ86YJ7 626 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 HIPK1Q86Z02 1210 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 OFCC1Q8IZS5 231 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 GALNT16Q8N428 558 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SVOPLQ8N434 492 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 TMEM156Q8N614 296 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SLC5A8Q8N695 610 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 LILRB1Q8NHL6 650 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 B4GALNT2Q8NHY0 566 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SLC7A13Q8TCU3 470 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 GPR119Q8TDV5 335 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ADAMTS16Q8TE57 1224 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 KCNE4Q8WWG9 221 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 OIT3Q8WWZ8 545 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 EME1Q96AY2 570 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 INTS12Q96CB8 462 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 TMCO6Q96DC7 493 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 FAM122AQ96E09 287 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 NRBF2Q96F24 287 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SLC41A3Q96GZ6 507 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 WDYHV1Q96HA8 205 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZNF845Q96IR2 970 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 PRRC1Q96M27 445 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 FER1L6-AS2Q96M78 137 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 EPYCQ99645 322 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 NPAS1Q99742 590 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZNF559Q9BR84 538 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SRSF8Q9BRL6 282 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 C9orf16Q9BUW7 83 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 FNDC11Q9BVV2 318 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 OSBPL10Q9BXB5 764 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ANGPTL4Q9BY76 406 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 TBL1XR1Q9BZK7 514 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 TRIM2Q9C040 744 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ING2Q9H160 280 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ARMC7Q9H6L4 198 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 REEP1Q9H902 201 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CACYBPQ9HB71 228 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 EXOSC3Q9NQT5 275 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 ANKRD10Q9NXR5 420 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ALKBH4Q9NXW9 302 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 MRPL15Q9P015 296 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 MED11Q9P086 117 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 PDP1Q9P0J1 537 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 TMCC3Q9ULS5 477 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ICAM5Q9UMF0 924 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SLC35A3Q9Y2D2 325 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CHD8Q9HCK8 2581 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms