RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DPP4P27487 766 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 EMDP50402 254 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 GALK2Q01415 458 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM176BQ3YBM2 270 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 HES5Q5TA89 166 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 C3orf33Q6P1S2 294 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PRSS42Q7Z5A4 293 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 RPS19BP1Q86WX3 136 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 GRAMD2AQ8IUY3 354 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 DND1Q8IYX4 353 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 MFSD4AQ8N468 514 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 OR1L3Q8NH93 324 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 STK35Q8TDR2 534 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ANKRD9Q96BM1 317 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 HYLS1Q96M11 299 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 RBM24Q9BX46 236 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CHMP1AQ9HD42 196 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 NPAP1Q9NZP6 1156 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 RBM7Q9Y580 266 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PCYT1BQ9Y5K3 369 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 WIF1Q9Y5W5 379 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM269A0A1B0GVZ9 245 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 MEN1O00255 615 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 GPX5O75715 221 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ANXA3P12429 323 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 GTF2F2P13984 249 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 SPNP16150 400 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 HIST1H1CP16403 213 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 SPI1P17947 270 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 RPS19P39019 145 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PRKXP51817 358 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PPP1CAP62136 330 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 EEF1A1P68104 462 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 RNF4P78317 190 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CHAF1BQ13112 559 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC35D2Q76EJ3 337 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 DPY19L4Q7Z388 723 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PLCZ1Q86YW0 608 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ARIH2OSQ8N7S6 290 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 DTX3Q8N9I9 347 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 OR4D9Q8NGE8 314 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 OR5D14Q8NGL3 314 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 RASD2Q96D21 266 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ZG16BQ96DA0 208 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CDX2Q99626 313 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CDC6Q99741 560 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PIGQQ9BRB3 760 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 THAP7Q9BT49 309 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 MED18Q9BUE0 208 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 DPCDQ9BVM2 203 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 TANC1Q9C0D5 1861 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CST11Q9H112 138 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 C1orf198Q9H425 327 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 C12orf10Q9HB07 376 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 EXOSC3Q9NQT5 275 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 OSGIN1Q9UJX0 560 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PILRAQ9UKJ1 303 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ACAD8Q9UKU7 415 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 MCTS1Q9ULC4 181 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 MEMO1Q9Y316 297 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 FRMPD3Q5JV73 1810 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 IGHV3-20A0A0C4DH32 117 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ARPC3O15145 178 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM127O75204 238 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 VAMP5O95183 116 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 APEHP13798 732 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 POU3F2P20265 443 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PRSS3P35030 304 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ADH7P40394 386 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CBX5P45973 191 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CCL7P80098 99 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ALKBH1Q13686 389 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 TATDN3Q17R31 274 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ZMAT1Q5H9K5 638 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC25A30Q5SVS4 291 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 SFXN4Q6P4A7 337 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 LAX1Q8IWV1 398 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF100Q8IYN0 542 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 D2HGDHQ8N465 521 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 OR4N2Q8NGD1 307 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 HAVCR1Q96D42 359 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 MED30Q96HR3 178 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 MRGPRX4Q96LA9 322 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 IP6K3Q96PC2 410 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 FYTTD1Q96QD9 318 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 NUDT22Q9BRQ3 303 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 NUDT9Q9BW91 350 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 PLA2G12AQ9BZM1 189 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 SLIRPQ9GZT3 109 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 RAB33BQ9H082 229 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 DNAJB12Q9NXW2 375 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 MED11Q9P086 117 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 EMC3Q9P0I2 261 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF69Q9UC07 566 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 SIGLEC7Q9Y286 467 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 YARS2Q9Y2Z4 477 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 CCDC163A0A0D9SF12 145 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 FTCDNL1E5RQL4 147 aa4.86□□□□□ -1.63
SMNDC1-202ENST00000369603 FFAR1O14842 300 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms