RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 A0A0J9YY10 115 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 RPL36A-HNRNPH2H7BZ11 118 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SAP18O00422 153 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 CYR61O00622 381 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SLC19A2O60779 497 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SERPINA1P01009 418 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 C8GP07360 202 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 ADRA2AP08913 450 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 OR8U8P0C7N1 319 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 NDUFS1P28331 727 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 S100A3P33764 101 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 ILF3Q12906 894 aaKnown RBP eCLIP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PCBP2Q15366 365 aaKnown RBP eCLIP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 TSTQ16762 297 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PRSS53Q2L4Q9 553 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 DIRAS2Q96HU8 199 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 GFM1Q96RP9 751 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SSX3Q99909 188 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 RYDENQ9NUL5 291 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 C14orf105Q9NVL8 296 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 NTMQ9P121 344 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 CBLCQ9ULV8 474 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 DYRK1BQ9Y463 629 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 LOC102723532A0A0G2JNH3 316 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 OR6C68A6NDL8 312 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 OR7A17O14581 309 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 GBAP04062 536 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SBK2P0C263 348 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 APEHP13798 732 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 HIST1H1BP16401 226 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 CPEP16870 476 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 S1PR1P21453 382 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 GALP22466 123 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SSTR2P30874 369 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 RFX3P48380 749 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 MAT1AQ00266 395 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 MEF2AQ02078 507 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PRDX1Q06830 199 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 DUSP8Q13202 625 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF660Q6AZW8 331 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PLAG1Q6DJT9 500 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 OR2T5Q6IEZ7 315 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 AGTRAPQ6RW13 159 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 TMEM91Q6ZNR0 172 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SLCO4C1Q6ZQN7 724 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF621Q6ZSS3 439 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 FTMTQ8N4E7 242 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 KRTCAP2Q8N6L1 136 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 RBMXL3Q8N7X1 1067 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 RCBTB1Q8NDN9 531 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PXT1Q8NFP0 134 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 OR2T29Q8NH02 315 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PCNPQ8WW12 178 aaKnown RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 HSD17B8Q92506 261 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 RAB24Q969Q5 203 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PEX11GQ96HA9 241 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 TEX37Q96LM6 180 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SLAMF8Q9P0V8 285 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 UTS2RQ9UKP6 389 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PLEKHA6Q9Y2H5 1048 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 MED13Q9UHV7 2174 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 TRAPPC13A5PLN9 417 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 NDUFS8O00217 210 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 TSPAN2O60636 221 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 SLC16A8O95907 504 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 FHP07954 510 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF44P15621 663 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 APEX1P27695 318 aaKnown RBP6.25□□□□□ -1.41
CSDE1-204ENST00000369530 HOXC12P31275 282 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 S100A11P31949 105 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 SF1Q15637 639 aaKnown RBP6.25□□□□□ -1.41
CSDE1-204ENST00000369530 HYAL4Q2M3T9 481 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 SPANXN4Q5MJ08 99 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 Q6ZSR9 355 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 MRPL52Q86TS9 123 aaKnown RBP6.25□□□□□ -1.41
CSDE1-204ENST00000369530 DCUN1D3Q8IWE4 304 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 LNX2Q8N448 690 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 CT55Q8WUE5 264 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 FAM162AQ96A26 154 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 PHYHIPLQ96FC7 376 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 OTUB1Q96FW1 271 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-204ENST00000369530 IL17FQ96PD4 163 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 C1orf109Q9NX04 203 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 IL17BQ9UHF5 180 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 RUVBL1Q9Y265 456 aaKnown RBP6.25□□□□□ -1.41
CSDE1-204ENST00000369530 SF3B6Q9Y3B4 125 aaKnown RBP6.25□□□□□ -1.41
CSDE1-204ENST00000369530 IGHV1-45A0A0A0MS14 117 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 MANBAO00462 879 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF749O43361 778 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 SUSD5O60279 629 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 ADCYAP1P18509 176 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 PRKACGP22612 351 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 GALNSP34059 522 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 MAPK9P45984 424 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 RAP2BP61225 183 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 FAM53BQ14153 422 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 FAM122BQ7Z309 247 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF561Q8N587 486 aa6.25□□□□□ -1.41
CSDE1-204ENST00000369530 OR13C3Q8NGS6 347 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms