RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PRKYO43930 277 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 AQP8O94778 261 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 VAMP5O95183 116 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 HIST1H1CP16403 213 aaKnown RBP9.77□□□□□ -0.85
BRCC3-204ENST00000369462 PCYT1AP49585 367 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 TDGF1P3P51864 188 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 SLC17A1Q14916 467 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 SLC35D2Q76EJ3 337 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 ENTHD1Q8IYW4 607 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 OR4K13Q8NH42 304 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 ABHD3Q8WU67 409 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF775Q96BV0 537 aaPredicted RBP9.77□□□□□ -0.85
BRCC3-204ENST00000369462 TXNDC15Q96J42 360 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 TSPAN32Q96QS1 320 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 PRRG3Q9BZD7 231 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 TXNIPQ9H3M7 391 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 FANCFQ9NPI8 374 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 PNPLA3Q9NST1 481 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 UBAP1Q9NZ09 502 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF346Q9UL40 294 aaKnown RBP9.77□□□□□ -0.85
BRCC3-204ENST00000369462 RNF6Q9Y252 685 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 NOX1Q9Y5S8 564 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 ZGRF1Q86YA3 2104 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 CLCA1A8K7I4 914 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 SURF4O15260 269 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 BCL10O95999 233 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 APEHP13798 732 aaKnown RBP9.76□□□□□ -0.85
BRCC3-204ENST00000369462 SDHAP31040 664 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 GRK5P34947 590 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 RPL27P61353 136 aaKnown RBP9.76□□□□□ -0.85
BRCC3-204ENST00000369462 CD47Q08722 323 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 NFATC3Q12968 1075 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 MELKQ14680 651 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF362Q5T0B9 420 aaPredicted RBP9.76□□□□□ -0.85
BRCC3-204ENST00000369462 CYB561A3Q8NBI2 242 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 LSM14AQ8ND56 463 aaKnown RBP9.76□□□□□ -0.85
BRCC3-204ENST00000369462 OR52E2Q8NGJ4 325 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 OR8J1Q8NGP2 316 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 EMC6Q9BV81 110 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 CMC2Q9NRP2 79 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF226Q9NYT6 803 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 LOC102725191A0A1B0GVB3 256 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 IDH3BO43837 385 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 TPOP07202 933 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 RASGEF1BQ0VAM2 473 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 DBPQ10586 325 aaPredicted RBP9.76□□□□□ -0.85
BRCC3-204ENST00000369462 EEF1A1P5Q5VTE0 462 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 GPR139Q6DWJ6 353 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF585AQ6P3V2 769 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 ARIH2OSQ8N7S6 290 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 SDR9C7Q8NEX9 313 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 RHOXF1Q8NHV9 184 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 CNIH3Q8TBE1 160 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 OTULINQ96BN8 352 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 WBP1Q96G27 269 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 LRCH1Q9Y2L9 728 aa9.76□□□□□ -0.85
BRCC3-204ENST00000369462 FAM183AA6NL82 134 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 RIIAD1A6NNX1 92 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 TRAF3IP2O43734 574 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 CYTIPO60759 359 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 TGM6O95932 706 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 ACVR1BP36896 505 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 EFNB1P98172 346 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 KRR1Q13601 381 aaKnown RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 MAD2L1BPQ15013 274 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 PDK3Q15120 406 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 EMC4Q5J8M3 183 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 GFRALQ6UXV0 394 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 NHLRC1Q6VVB1 395 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 BCDIN3DQ7Z5W3 292 aaKnown RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 MARVELD2Q8N4S9 558 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 OR9K2Q8NGE7 335 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 ZPLD1Q8TCW7 415 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 RNF128Q8TEB7 428 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 TRUB1Q8WWH5 349 aaKnown RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 NMNAT3Q96T66 252 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 HSPE1-MOB4S4R3N1 261 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 SLC22A20A6NK97 555 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF716A6NP11 495 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 KDM4EB2RXH2 506 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 H7C1C5 153 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 ARHGEF9O43307 516 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 TXNDC12O95881 172 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 IFNGP01579 166 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 ABOP16442 354 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 CDKN2AP42771 156 aaKnown RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 DAP3P51398 398 aaKnown RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 BIDP55957 195 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 LCN6P62502 163 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 RUNX1T1Q06455 604 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 CRMP1Q14194 572 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 MESTQ5EB52 335 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 ARMC4Q5T2S8 1044 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 ABLIM2Q6H8Q1 611 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 CREB3L2Q70SY1 520 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 LRR1Q96L50 414 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF385AQ96PM9 386 aaKnown RBP9.75□□□□□ -0.85
BRCC3-204ENST00000369462 TRIB1Q96RU8 372 aa9.75□□□□□ -0.85
BRCC3-204ENST00000369462 SF3B5Q9BWJ5 86 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms