RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 PFN4Q8NHR9 129 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 SPSB2Q99619 263 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 C20orf141Q9NUB4 165 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 SIGLEC7Q9Y286 467 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 PCDHGA1Q9Y5H4 931 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 A0A1B0GV90 55 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 VEGFDO43915 354 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 RPN2P04844 631 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 CD14P08571 375 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 ACTBP60709 375 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 ACTG1P63261 375 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 ANKRD16Q6P6B7 361 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 ZNF565Q8N9K5 539 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 OR13C2Q8NGS9 318 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 TMEM239Q8WW34 195 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 ZMYND19Q96E35 227 aaPredicted RBP16.4■□□□□ 0.22
CHTOP-201ENST00000368686 ZDHHC6Q9H6R6 413 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 TUBA4BQ9H853 241 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 LPAR3Q9UBY5 353 aa16.4■□□□□ 0.22
CHTOP-201ENST00000368686 ZNF443Q9Y2A4 671 aaPredicted RBP16.4■□□□□ 0.22
CHTOP-201ENST00000368686 C9orf170A2RU37 121 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 IDSB3KWA1 339 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 RNASEK-C17orf49H0YIS7 233 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 NDUFS4O43181 175 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 FAM157CP0CG43 387 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 GABRR2P28476 465 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 LAP3P28838 519 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 AVPR2P30518 371 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 HTRA4P83105 476 aaPredicted RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 GGTLC2Q14390 218 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 NKPD1Q17RQ9 610 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 ALG11Q2TAA5 492 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 AMZ1Q400G9 498 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 PRAMEF17Q5VTA0 474 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 MRM1Q6IN84 353 aaKnown RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 TMEM220Q6QAJ8 160 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 Q6ZVL8 140 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 DPPA4Q7L190 304 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 ZNF227Q86WZ6 799 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 OR2L13Q8N349 312 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 ARL14Q8N4G2 192 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 OR8S1Q8NH09 359 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 CPNE4Q96A23 557 aaPredicted RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 OTUB2Q96DC9 234 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 SEC22AQ96IW7 307 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 MAP3K3Q99759 626 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 AIF1LQ9BQI0 150 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 RIOK2Q9BVS4 552 aaKnown RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 LAT2Q9GZY6 243 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 CHRDQ9H2X0 955 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 ICAM5Q9UMF0 924 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 COL4A3Q01955 1670 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 TEX13DA0A0J9YY54 714 aaPredicted RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 LILRB5O75023 590 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 INHAP05111 366 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 RPLP2P05387 115 aaKnown RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 CTSLP07711 333 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 CD63P08962 238 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 PRSS3P35030 304 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 THPOP40225 353 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 ACTR1BP42025 376 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 TAS2R19P59542 299 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 POLR2LP62875 67 aaKnown RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 GUCA2AQ02747 115 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 PRKCZQ05513 592 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 ELAVL1Q15717 326 aaKnown RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 TMPRSS11FQ6ZWK6 438 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 RANBP3LQ86VV4 465 aaPredicted RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 TMPRSS12Q86WS5 348 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 GABRG1Q8N1C3 465 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 TMED6Q8WW62 240 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 ZBTB8AQ96BR9 441 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 SAT2Q96F10 170 aaPredicted RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 TSPAN10Q9H1Z9 355 aaPredicted RBP16.39■□□□□ 0.21
CHTOP-201ENST00000368686 SLC45A1Q9Y2W3 748 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 Q9Y3F1 56 aa16.39■□□□□ 0.21
CHTOP-201ENST00000368686 TBC1D3EA0A087X179 549 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 MFNGO00587 321 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 PTGER1P34995 402 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 GLP1RP43220 463 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 HGFACQ04756 655 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 OR7A5Q15622 319 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 YOD1Q5VVQ6 348 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-201ENST00000368686 ARHGAP11AQ6P4F7 1023 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 SLC35F3Q8IY50 421 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 OR4K17Q8NGC6 315 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 RGP1Q92546 391 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-201ENST00000368686 DVL3Q92997 716 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-201ENST00000368686 FKRPQ9H9S5 495 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 PPP4R1LQ9P1A2 415 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 STEAP1Q9UHE8 339 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 TSPAN11A1L157 253 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 CCSO14618 274 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 ZNF208O43345 1280 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 OIP5O43482 229 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 CTAG2O75638 210 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 LY86O95711 162 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 CTSAP10619 480 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 GJA5P36382 358 aa16.38■□□□□ 0.21
CHTOP-201ENST00000368686 NAA10P41227 235 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms