RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 C15orf40Q8WUR7 153 aa13.74□□□□□ -0.21
SHC1-205ENST00000368453 ZNRF4Q8WWF5 429 aa13.74□□□□□ -0.21
SHC1-205ENST00000368453 C14orf79Q96F83 325 aa13.74□□□□□ -0.21
SHC1-205ENST00000368453 Q96M85 177 aa13.74□□□□□ -0.21
SHC1-205ENST00000368453 PTCHD1Q96NR3 888 aa13.74□□□□□ -0.21
SHC1-205ENST00000368453 LGR4Q9BXB1 951 aa13.74□□□□□ -0.21
SHC1-205ENST00000368453 ULBP3Q9BZM4 244 aa13.74□□□□□ -0.21
SHC1-205ENST00000368453 FAM117AQ9C073 453 aa13.74□□□□□ -0.21
SHC1-205ENST00000368453 A0A0B4J2A0 478 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 CTNSO60931 367 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 ADAMTS4O75173 837 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 OR2F2O95006 317 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 HLA-AP01891 365 aaKnown RBP13.73□□□□□ -0.21
SHC1-205ENST00000368453 SLC2A5P22732 501 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 ILF3Q12906 894 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■□□□□ 8.4
SHC1-205ENST00000368453 OR2F1Q13607 317 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 MPPED2Q15777 294 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 DUSP5Q16690 384 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 MICBQ29980 383 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 EIF2S3LQ2VIR3 472 aaKnown RBP13.73□□□□□ -0.21
SHC1-205ENST00000368453 AMZ2Q86W34 360 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 MRPL48Q96GC5 212 aaKnown RBP13.73□□□□□ -0.21
SHC1-205ENST00000368453 ATG5Q9H1Y0 275 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 PELI2Q9HAT8 420 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 PRSS16Q9NQE7 514 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 IL36AQ9UHA7 158 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 SHPKQ9UHJ6 478 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 ZNF223Q9UK11 482 aaPredicted RBP13.73□□□□□ -0.21
SHC1-205ENST00000368453 LEFTY2O00292 366 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 LATO43561 262 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 ADRA2CP18825 462 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 SKP1P63208 163 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 REEP5Q00765 189 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 RPL13AP3Q6NVV1 102 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 ACOT7LQ6ZUV0 252 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 ZNF227Q86WZ6 799 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 SYS1Q8N2H4 156 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 ZNF511Q8NB15 262 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 OR7G2Q8NG99 324 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 TMEM27Q9HBJ8 222 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 UPB1Q9UBR1 384 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 GHRLQ9UBU3 117 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 SLC23A2Q9UGH3 650 aa13.73□□□□□ -0.21
SHC1-205ENST00000368453 C4orf51C9J302 202 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 GPRIN2O60269 458 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 EIF1BO60739 113 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 PMS2P2O95744 297 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 DCNP07585 359 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 CALCBP10092 127 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 VAMP1P23763 118 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 EIF1P41567 113 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 ARHGAP40Q5TG30 622 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 ZNF676Q8N7Q3 588 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 SPSB2Q99619 263 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 TNFSF18Q9UNG2 199 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 GXYLT2A0PJZ3 443 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 C5orf51A6NDU8 294 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 XRCC3O43542 346 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 PTAFRP25105 342 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 MECP2P51608 486 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 BTN3A2P78410 334 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 FABP9Q0Z7S8 132 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 IRF5Q13568 498 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 TCEA2Q15560 299 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 EIPR1Q53HC9 387 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 PRAMEF8Q5VWM4 474 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 PRAMEF7Q5VXH5 474 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 ARHGAP11AQ6P4F7 1023 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 PGAP1Q75T13 922 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 GAREM2Q75VX8 874 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 MTSS1LQ765P7 747 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 CD163Q86VB7 1156 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 OR5AK2Q8NH90 309 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 ZBTB8AQ96BR9 441 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 MOAP1Q96BY2 351 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 MYADMQ96S97 322 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 AICDAQ9GZX7 198 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 SAGE1Q9NXZ1 904 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 DPP7Q9UHL4 492 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 SLC22A7Q9Y694 548 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 MDC1Q14676 2089 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 GGT3PA6NGU5 568 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 SMIM6P0DI80 62 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 ZNF14P17017 642 aaPredicted RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 PNLIPRP2P54317 469 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 ETV3LQ6ZN32 361 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 PARS2Q7L3T8 475 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 FAM220AQ7Z4H9 259 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 CACUL1Q86Y37 369 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 NUBPLQ8TB37 319 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 RGP1Q92546 391 aaPredicted RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 NUS1Q96E22 293 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 TRMT2BQ96GJ1 504 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 ADAD1Q96M93 576 aaKnown RBP13.72□□□□□ -0.21
SHC1-205ENST00000368453 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
SHC1-205ENST00000368453 TMEM72A0PK05 275 aa13.71□□□□□ -0.21
SHC1-205ENST00000368453 TSPAN11A1L157 253 aa13.71□□□□□ -0.21
SHC1-205ENST00000368453 LILRB5O75023 590 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms