RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 DGCR2P98153 550 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 DUSP2Q05923 314 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 MADCAM1Q13477 382 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 FGFBP1Q14512 234 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 OPCMLQ14982 345 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 AMZ1Q400G9 498 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 NHLRC3Q5JS37 347 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 SLC35D3Q5M8T2 416 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 ZNF425Q6IV72 752 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 FAM122CQ6P4D5 195 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 OLIG3Q7RTU3 272 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 KCTD20Q7Z5Y7 419 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 VASH2Q86V25 355 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 OR2L13Q8N349 312 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 LRRC25Q8N386 305 aaPredicted RBP10.53□□□□□ -0.72
USF1-201ENST00000368019 OR51Q1Q8NH59 317 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 RAB40AQ8WXH6 277 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 NSMAFQ92636 917 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 KAT2AQ92830 837 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 EXTL1Q92935 676 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 C4orf36Q96KX1 117 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 OR2A7Q96R45 310 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 DPYSL5Q9BPU6 564 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 YIPF4Q9BSR8 244 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 DPCDQ9BVM2 203 aaPredicted RBP10.53□□□□□ -0.72
USF1-201ENST00000368019 TEX101Q9BY14 249 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 SPRTNQ9H040 489 aaPredicted RBP10.53□□□□□ -0.72
USF1-201ENST00000368019 QRSL1Q9H0R6 528 aaKnown RBP10.53□□□□□ -0.72
USF1-201ENST00000368019 WDR26Q9H7D7 661 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 NRIP3Q9NQ35 241 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 ICAM5Q9UMF0 924 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 ETV7Q9Y603 341 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 CDHR4A6H8M9 788 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 B4DGG1 531 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 CDK2AP1O14519 115 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 DVL2O14641 736 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 FRS3O43559 492 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 SSNA1O43805 119 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 PTP4A3O75365 173 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 CALCBP10092 127 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 PRG2P13727 222 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 NID1P14543 1247 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 ATF1P18846 271 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 CD82P27701 267 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 NDUFS1P28331 727 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 CD1CP29017 333 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 PTGS2P35354 604 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 GDNFP39905 211 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 SRP9P49458 86 aaKnown RBP10.52□□□□□ -0.73
USF1-201ENST00000368019 GDI2P50395 445 aaKnown RBP10.52□□□□□ -0.73
USF1-201ENST00000368019 BLVRAP53004 296 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 MAZP56270 477 aaKnown RBP10.52□□□□□ -0.73
USF1-201ENST00000368019 OR1D5P58170 312 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 ZP1P60852 638 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 TNFRSF17Q02223 184 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 LGALS3BPQ08380 585 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 SQSTM1Q13501 440 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 IL10RAQ13651 578 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 TBR1Q16650 682 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 SLC25A35Q3KQZ1 300 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 MANEAQ5SRI9 462 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 FAM198BQ6UWH4 519 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 IL20RBQ6UXL0 311 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 GLDNQ6ZMI3 551 aaPredicted RBP10.52□□□□□ -0.73
USF1-201ENST00000368019 DNM1P46Q6ZS02 220 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 NLRC3Q7RTR2 1065 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 OR9A2Q8NGT5 310 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 SMPDL3BQ92485 455 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 PTP4A1Q93096 173 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 CLIP3Q96DZ5 547 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 SCARF2Q96GP6 870 aaPredicted RBP10.52□□□□□ -0.73
USF1-201ENST00000368019 RBM18Q96H35 190 aaKnown RBP10.52□□□□□ -0.73
USF1-201ENST00000368019 FERD3LQ96RJ6 166 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 ZNF559Q9BR84 538 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 SLC6A20Q9NP91 592 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 DUSP22Q9NRW4 184 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 TAS2R5Q9NYW4 299 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 KLHL9Q9P2J3 617 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 SLC23A2Q9UGH3 650 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 IL17BQ9UHF5 180 aa10.52□□□□□ -0.73
USF1-201ENST00000368019 LOC105369274A0A096LPK9 316 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 IGHV5-10-1A0A0J9YXX1 117 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 PLSCR5A0PG75 271 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 OR2M5A3KFT3 312 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 FAM183AA6NL82 134 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 C4orf51C9J302 202 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 AGRPO00253 132 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 MEN1O00255 615 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 SERPINI2O75830 405 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 KRT33AO76009 404 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 FAM87AP0C7U9 286 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 SFTPCP11686 197 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 CCL4P13236 92 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 MAKP20794 623 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 AK4P27144 223 aaPredicted RBP10.51□□□□□ -0.73
USF1-201ENST00000368019 CD96P40200 585 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 GPR3P46089 330 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 SLC3A1Q07837 685 aa10.51□□□□□ -0.73
USF1-201ENST00000368019 POU4F3Q15319 338 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 217.4 ms