RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 HSPA12BQ96MM6 686 aa13.45□□□□□ -0.26
PRKN-204ENST00000366896 PTCHD1Q96NR3 888 aa13.45□□□□□ -0.26
PRKN-204ENST00000366896 TRIM2Q9C040 744 aa13.45□□□□□ -0.26
PRKN-204ENST00000366896 DUSP15Q9H1R2 295 aaPredicted RBP13.45□□□□□ -0.26
PRKN-204ENST00000366896 CCDC86Q9H6F5 360 aaKnown RBP13.45□□□□□ -0.26
PRKN-204ENST00000366896 CAPN10Q9HC96 672 aa13.45□□□□□ -0.26
PRKN-204ENST00000366896 FLRT3Q9NZU0 649 aa13.45□□□□□ -0.26
PRKN-204ENST00000366896 AKAP7Q9P0M2 348 aaPredicted RBP13.45□□□□□ -0.26
PRKN-204ENST00000366896 FBXO4Q9UKT5 387 aa13.45□□□□□ -0.26
PRKN-204ENST00000366896 FBXL3Q9UKT7 428 aa13.45□□□□□ -0.26
PRKN-204ENST00000366896 A0A0C4DFX4 3053 aa13.45□□□□□ -0.26
PRKN-204ENST00000366896 POM121CA8CG34 1229 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 AIPO00170 330 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 NGFRP08138 427 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 S100A11P31949 105 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 RABIFP47224 123 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 OR5M10Q6IEU7 315 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 SLC25A25Q6KCM7 469 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 FIGLAQ6QHK4 219 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 LINC00114Q6XXX2 140 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 CMTM4Q8IZR5 234 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 EIF4E3Q8N5X7 224 aaKnown RBP13.44□□□□□ -0.26
PRKN-204ENST00000366896 OR13H1Q8NG92 308 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 LGALS14Q8TCE9 139 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 TCRBV16S1A1N1A0A5B0 115 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 CYR61O00622 381 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 PDCD5O14737 125 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 ADRB1P08588 477 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 MAOBP27338 520 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 AVPR2P30518 371 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 GABRA3P34903 492 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 PSMA6P60900 246 aaKnown RBP13.44□□□□□ -0.26
PRKN-204ENST00000366896 SRSF5Q13243 272 aaKnown RBP13.44□□□□□ -0.26
PRKN-204ENST00000366896 TP53I3Q53FA7 332 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 ENPP7Q6UWV6 458 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 UNQ9370/PRO34162Q6UXP9 181 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 LINGO2Q7L985 606 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 NAXDQ8IW45 347 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 MEIOBQ8N635 442 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 ZNF614Q8N883 585 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 TSACCQ96A04 125 aaPredicted RBP13.44□□□□□ -0.26
PRKN-204ENST00000366896 WDR92Q96MX6 357 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 TNFRSF13CQ96RJ3 184 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 MCCC2Q9HCC0 563 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 GPR27Q9NS67 375 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 TAS2R5Q9NYW4 299 aa13.44□□□□□ -0.26
PRKN-204ENST00000366896 THADAQ6YHU6 1953 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 A6NCN8 305 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 RP2O75695 350 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 PROS1P07225 676 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 PVRP15151 417 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 ISXQ2M1V0 245 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 SHEQ5VZ18 495 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 ZNF626Q68DY1 528 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 RPL22L1Q6P5R6 122 aaKnown RBP13.43□□□□□ -0.26
PRKN-204ENST00000366896 SLC22A18ASQ8N1D0 253 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 WDR89Q96FK6 387 aaPredicted RBP13.43□□□□□ -0.26
PRKN-204ENST00000366896 MRPL48Q96GC5 212 aaKnown RBP13.43□□□□□ -0.26
PRKN-204ENST00000366896 ZFYVE21Q9BQ24 234 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 NOX3Q9HBY0 568 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 ZNF69Q9UC07 566 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 CHRNA9Q9UGM1 479 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 KMT2EQ8IZD2 1858 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 A0A1B0GWA3 101 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 ANXA2P2A6NMY6 339 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 GABARAPH6UMI1 98 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 GPRIN2O60269 458 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 GABRA1P14867 456 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 ACTR1BP42025 376 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 AP3S2P59780 193 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 ACTR1AP61163 376 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 SEC61A1P61619 476 aaKnown RBP13.43□□□□□ -0.26
PRKN-204ENST00000366896 APOOLQ6UXV4 268 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 OR51L1Q8NGJ5 315 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 OR52I2Q8NH67 350 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 C1orf216Q8TAB5 229 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 ZNF671Q8TAW3 534 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 FAM174AQ8TBP5 190 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 RPS4Y2Q8TD47 263 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 DNASE2BQ8WZ79 361 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 ZMYND19Q96E35 227 aaPredicted RBP13.43□□□□□ -0.26
PRKN-204ENST00000366896 UTP23Q9BRU9 249 aaKnown RBP13.43□□□□□ -0.26
PRKN-204ENST00000366896 ZNF416Q9BWM5 594 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 SLC6A15Q9H2J7 730 aa13.43□□□□□ -0.26
PRKN-204ENST00000366896 LRP4O75096 1905 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 HMSDA8MTL9 139 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 CREBL2O60519 120 aaPredicted RBP13.42□□□□□ -0.26
PRKN-204ENST00000366896 HIST1H2ABP04908 130 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 THEGLP0DJG4 465 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 RAB3AP20336 220 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 ACAA2P42765 397 aaKnown RBP13.42□□□□□ -0.26
PRKN-204ENST00000366896 GDI2P50395 445 aaKnown RBP13.42□□□□□ -0.26
PRKN-204ENST00000366896 EMDP50402 254 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 SIRPAP78324 504 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 ETFDHQ16134 617 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 OLFML2AQ68BL7 652 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 DGAT2L6Q6ZPD8 337 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 TMUB2Q71RG4 321 aa13.42□□□□□ -0.26
PRKN-204ENST00000366896 HIST3H2AQ7L7L0 130 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms