RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SLC30A8Q8IWU4 369 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 C20orf196Q8IYI0 205 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PIK3C3Q8NEB9 887 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 OR10A6Q8NH74 314 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 HTRA1Q92743 480 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TAMM41Q96BW9 452 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TXNDC15Q96J42 360 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MCHR1Q99705 422 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 RHNO1Q9BSD3 238 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 NANOGQ9H9S0 305 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SEC61A2Q9H9S3 476 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CRLF2Q9HC73 371 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MOV10Q9HCE1 1003 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ABCA1O95477 2261 aa11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SONP18583 2426 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF99A8MXY4 864 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CRLF1O75462 422 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 F12P00748 615 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MT-ATP6P00846 226 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 EFNA4P52798 201 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 NUDT6P53370 316 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 UBE2NP61088 152 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 HGFACQ04756 655 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CHRNB3Q05901 458 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PUDPQ08623 228 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 C1DQ13901 141 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 VMACQ2NL98 169 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ENTPD8Q5MY95 495 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PXKQ7Z7A4 578 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PATL1Q86TB9 770 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 UEVLDQ8IX04 471 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 GPR137CQ8N3F9 429 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF525Q8N782 197 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 NANOS1Q8WY41 292 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF75AQ96N20 296 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 EMC6Q9BV81 110 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TMEM120AQ9BXJ8 343 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ASPNQ9BXN1 380 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CA10Q9NS85 328 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 B3GNT2Q9NY97 397 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SELENONQ9NZV5 590 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SLC13A4Q9UKG4 626 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 NOX1Q9Y5S8 564 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 YLPM1P49750 1951 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MXRA5Q9NR99 2828 aa11.87□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SLC35F4A4IF30 521 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 AKAP8O43823 692 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 GPRIN2O60269 458 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PDE5AO76074 875 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CRYAAP02489 173 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CELA3BP08861 270 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PPP2R2BQ00005 443 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 LOXL1Q08397 574 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZP4Q12836 540 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PMS2P3Q13401 168 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 EFNB3Q15768 340 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ADIPOQQ15848 244 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TRMT5Q32P41 509 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 COQ5Q5HYK3 327 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CCDC36Q8IYA8 594 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 NUP37Q8NFH4 326 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 OR5J2Q8NH18 312 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ADAMTS16Q8TE57 1224 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 C10orf105Q8TEF2 133 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PRSS27Q9BQR3 290 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 MED29Q9NX70 200 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TAS2R5Q9NYW4 299 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF224Q9NZL3 707 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PMF1-BGLAPU3KQ54 211 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TRAPPC13A5PLN9 417 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CPSF4LA6NMK7 179 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 VWC2LB2RUY7 222 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 M0R3G1 203 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TLX2O43763 284 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 NPPAP01160 153 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 BMP4P12644 408 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 NQO1P15559 274 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ARR3P36575 388 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SERPINF1P36955 418 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 POU3F1Q03052 451 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 KLF10Q13118 480 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CYLC2Q14093 348 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF74Q16587 644 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 RABL3Q5HYI8 236 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 INTS11Q5TA45 600 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 CLEC2AQ6UVW9 174 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 OR4F15Q8NGB8 312 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 OR8J3Q8NGG0 315 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 RNF217Q8TC41 542 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 LRRC58Q96CX6 371 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 FBXO17Q96EF6 278 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ZNF583Q96ND8 569 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 PLK3Q9H4B4 646 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 SAR1AQ9NR31 198 aa11.86□□□□□ -0.51
TNFRSF1A-202ENST00000366159 ATRQ13535 2644 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 IGHV2OR16-5A0A0B4J2B6 119 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 TMEM129A0AVI4 362 aa11.85□□□□□ -0.51
TNFRSF1A-202ENST00000366159 B9A039 149 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms