RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 OR6X1Q8NH79 312 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 LRTOMTQ8WZ04 291 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF385AQ96PM9 386 aaKnown RBP12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 TNFRSF13CQ96RJ3 184 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF556Q9HAH1 456 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 MCCC2Q9HCC0 563 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 PDP1Q9P0J1 537 aaPredicted RBP12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 INTS1Q8N201 2190 aaKnown RBP12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 SPTBN1Q01082 2364 aaKnown RBP12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 TENM4Q6N022 2769 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 TRAV27A0A087WT01 109 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF726A6NNF4 738 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 C11orf98E9PRG8 122 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 G3V2T6 193 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 BCL10O95999 233 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 NR2C1P13056 603 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 APEHP13798 732 aaKnown RBP12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 CLDN17P56750 224 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 LAPTM4AQ15012 233 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 P2RY6Q15077 328 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 RFX4Q33E94 735 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 FBXW9Q5XUX1 488 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 CASP12Q6UXS9 341 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 DPY19L2P2Q6ZN68 376 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 RASSF6Q6ZTQ3 369 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 SLC35D2Q76EJ3 337 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 ABHD12BQ7Z5M8 362 aaPredicted RBP12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 TMEM179BQ7Z7N9 219 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 KDM8Q8N371 416 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 LRRC75AQ8NAA5 344 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 RELL2Q8NC24 303 aaPredicted RBP12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 OR9Q2Q8NGE9 314 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 OR13C2Q8NGS9 318 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 FEVQ99581 238 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 GPA33Q99795 319 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 USB1Q9BQ65 265 aaKnown RBP12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 LINC00470Q9BZP3 86 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 TXNIPQ9H3M7 391 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 IL20Q9NYY1 176 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 MALT1Q9UDY8 824 aa12.25□□□□□ -0.45
NSMCE1-201ENST00000361439 EEF1E1-BLOC1S5C9J1V9 151 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 EEF1E1O43324 174 aaKnown RBP12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 IDH3BO43837 385 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 AHCYL1O43865 530 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 SLC43A1O75387 559 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 SMNDC1O75940 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 CD14P08571 375 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 HLA-DOBP13765 273 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 IFNGR1P15260 489 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 SLC6A6P31641 620 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 IST1P53990 364 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 TFF3Q07654 80 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 PPP1R8Q12972 351 aaKnown RBP12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 STK11Q15831 433 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 C1QTNF12Q5T7M4 302 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 GPR139Q6DWJ6 353 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF620Q6ZNG0 422 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 AMIGO2Q86SJ2 522 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 MOSPD2Q8NHP6 518 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 FNDC8Q8TC99 324 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF775Q96BV0 537 aaPredicted RBP12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 SLC25A44Q96H78 314 aaPredicted RBP12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 HDHD5Q9BXW7 423 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 GABARAPL1Q9H0R8 117 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 OR10A4Q9H209 315 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 SLCO5A1Q9H2Y9 848 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 C12orf49Q9H741 205 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 NRIP3Q9NQ35 241 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 ENOPH1Q9UHY7 261 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 CDH10Q9Y6N8 788 aa12.24□□□□□ -0.45
NSMCE1-201ENST00000361439 SLC35F4A4IF30 521 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 A6NIZ1 184 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 MCIDASD6RGH6 385 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ANKRD65E5RJM6 399 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 IMPA2O14732 288 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ARPC3O15145 178 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 IGHG1P01857 330 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF23P17027 643 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 NTF4P34130 210 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 RPL4P36578 427 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 RPS6KA3P51812 740 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 CTXN1P60606 82 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 RAP1BP61224 184 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 RPL27P61353 136 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 RAP1AP62834 184 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 SORDQ00796 357 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ACKR1Q16570 336 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 HMBOX1Q6NT76 420 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 NIPAL3Q6P499 406 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 FAHD1Q6P587 224 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF474Q6S9Z5 364 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF771Q7L3S4 317 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 SSX8Q7RTT4 187 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 LSRQ86X29 649 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 KIF18BQ86Y91 864 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 TMEM123Q8N131 208 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 GABRG1Q8N1C3 465 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 PQLC1Q8N2U9 271 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 PARP8Q8N3A8 854 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms