RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 LY6G6EA0A0G2JKS1 128 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 A0A1B0GVC2 190 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 A6NIN4 97 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 KHNYNO15037 678 aaKnown RBP20.52■□□□□ 0.88
LDB1-201ENST00000361198 TOX3O15405 576 aaPredicted RBP20.52■□□□□ 0.88
LDB1-201ENST00000361198 WISP1O95388 367 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 TIAF1O95411 115 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 SLC35D3Q5M8T2 416 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 POMZP3Q6PJE2 187 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 CREB3L2Q70SY1 520 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 DTX3Q8N9I9 347 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 OR13C5Q8NGS8 318 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 TAAR8Q969N4 342 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 SCMH1Q96GD3 660 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 HYLS1Q96M11 299 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 TBL1XR1Q9BZK7 514 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 SRPK3Q9UPE1 567 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 U3KQA8 63 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 A0A1W2PQD3 144 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 A0A1W2PQM1 296 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 FAM171A2A8MVW0 826 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 SERPINA3P01011 423 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 UQCRC1P31930 480 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 PNLIPRP2P54317 469 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 NTRK2Q16620 822 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 CDONQ4KMG0 1287 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 SYS1Q8N2H4 156 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 HAVCR2Q8TDQ0 301 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 DNAJA3Q96EY1 480 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 TSSK2Q96PF2 358 aa20.52■□□□□ 0.88
LDB1-201ENST00000361198 A0A1W2PRG6 482 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 NUDT14O95848 222 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 ACTA2P62736 377 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 ACTG2P63267 376 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 RPL18Q07020 188 aaKnown RBP20.51■□□□□ 0.87
LDB1-201ENST00000361198 MRPL28Q13084 256 aaKnown RBP20.51■□□□□ 0.87
LDB1-201ENST00000361198 LINC01590Q5TEZ4 76 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 UBALD2Q8IYN6 164 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 LSM14AQ8ND56 463 aaKnown RBP20.51■□□□□ 0.87
LDB1-201ENST00000361198 SNX33Q8WV41 574 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 HSD17B8Q92506 261 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 OR6C1Q96RD1 312 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 DUSP23Q9BVJ7 150 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 TGIF2Q9GZN2 237 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 GHITMQ9H3K2 345 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 C12orf10Q9HB07 376 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 ABRACLQ9P1F3 81 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 OR6C76A6NM76 312 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 NOTOA8MTQ0 251 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 UBL3O95164 117 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 DHFRP00374 187 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 PNLIPP16233 465 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 MMP15P51511 669 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 BTBD16Q32M84 506 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 JAZF1Q86VZ6 243 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 OR5H6Q8NGV6 325 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 SMIM19Q96E16 107 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 ZNF346Q9UL40 294 aaKnown RBP20.51■□□□□ 0.87
LDB1-201ENST00000361198 FRYLO94915 3013 aa20.51■□□□□ 0.87
LDB1-201ENST00000361198 A0A1B0GTQ1 180 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 ERVH48-1M5A8F1 160 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 AKR7A2O43488 359 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 SIGLEC6O43699 453 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 EIF4E2O60573 245 aaKnown RBP20.5■□□□□ 0.87
LDB1-201ENST00000361198 GLCEO94923 617 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 CD1AP06126 327 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 APEHP13798 732 aaKnown RBP20.5■□□□□ 0.87
LDB1-201ENST00000361198 SDHAP31040 664 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 IL10RAQ13651 578 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 CEP78Q5JTW2 689 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 C1QL3Q5VWW1 255 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 SAP25Q8TEE9 199 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 YIPF5Q969M3 257 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 GUCD1Q96NT3 240 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 ALG12Q9BV10 488 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 GNG8Q9UK08 70 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 WDFY3Q8IZQ1 3526 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 SMLR1H3BR10 107 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 EPXP11678 715 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 ATF1P18846 271 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 CXCR1P25024 350 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 SIRPAP78324 504 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 CCL7P80098 99 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 CDK5R1Q15078 307 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 NR0B2Q15466 257 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 C16orf47Q6ZP98 133 aaPredicted RBP20.5■□□□□ 0.87
LDB1-201ENST00000361198 KRT74Q7RTS7 529 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 NANOGNBQ7Z5D8 188 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 THAP4Q8WY91 577 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 DPAGT1Q9H3H5 408 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 MRPL39Q9NYK5 338 aaKnown RBP20.5■□□□□ 0.87
LDB1-201ENST00000361198 NCDNQ9UBB6 729 aa20.5■□□□□ 0.87
LDB1-201ENST00000361198 SRP9P49458 86 aaKnown RBP20.49■□□□□ 0.87
LDB1-201ENST00000361198 GBX2P52951 348 aaPredicted RBP20.49■□□□□ 0.87
LDB1-201ENST00000361198 RNF4P78317 190 aa20.49■□□□□ 0.87
LDB1-201ENST00000361198 ACY1Q03154 408 aa20.49■□□□□ 0.87
LDB1-201ENST00000361198 BCL2L15Q5TBC7 163 aa20.49■□□□□ 0.87
LDB1-201ENST00000361198 PMS2CLQ68D20 193 aa20.49■□□□□ 0.87
LDB1-201ENST00000361198 ZNF767PQ75MW2 155 aa20.49■□□□□ 0.87
LDB1-201ENST00000361198 RABEPKQ7Z6M1 372 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms