RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 OR2A2Q6IF42 318 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 GPAT4Q86UL3 456 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 UEVLDQ8IX04 471 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 GALNT4Q8N4A0 578 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 GMPPAQ96IJ6 420 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 DMRTA2Q96SC8 542 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 TSSK6Q9BXA6 273 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 GABARAPL3Q9BY60 117 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 NDEL1Q9GZM8 345 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 NRIP3Q9NQ35 241 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 IL20RAQ9UHF4 553 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 ENOPH1Q9UHY7 261 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 MEMO1Q9Y316 297 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 PHF3Q92576 2039 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 DOCK7Q96N67 2140 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 ARPC3O15145 178 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 SS18L1O75177 396 aaPredicted RBP11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 IL2RAP01589 272 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 IGHMP01871 453 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 YES1P07947 543 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 APEHP13798 732 aaKnown RBP11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 GNLYP22749 145 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 RPL4P36578 427 aaKnown RBP11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 GIPRP48546 466 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 CDK5Q00535 292 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 POU3F1Q03052 451 aaPredicted RBP11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 NPRL3Q12980 569 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 C1DQ13901 141 aaKnown RBP11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 RIPPLY2Q5TAB7 128 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 TMEM211Q6ICI0 200 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 SLC35D2Q76EJ3 337 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 FAM122BQ7Z309 247 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 IGFN1Q86VF2 1251 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 ATCAYQ86WG3 371 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 MCEMP1Q8IX19 187 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 TUSC5Q8IXB3 177 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 MARVELD2Q8N4S9 558 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 TXNDC15Q96J42 360 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 ZFP3Q96NJ6 502 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 RDH12Q96NR8 316 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 ZNF385AQ96PM9 386 aaKnown RBP11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 TACO1Q9BSH4 297 aaKnown RBP11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 KATNB1Q9BVA0 655 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 TXNIPQ9H3M7 391 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 SH3BGRL2Q9UJC5 107 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 ORC6Q9Y5N6 252 aa11.02□□□□□ -0.64
NIF3L1-201ENST00000359683 LRRK2Q5S007 2527 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 A0A1W2PRG6 482 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 CLEC18AA5D8T8 446 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 E9PQ18 207 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 H3BN98 237 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 BHLHE40O14503 412 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 IMPA2O14732 288 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 IDH3BO43837 385 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 TXNDC12O95881 172 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 CRHP06850 196 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 IFNGR1P15260 489 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 CDH2P19022 906 aaPredicted RBP11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 POU1F1P28069 291 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 EPHA2P29317 976 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 NTF4P34130 210 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 POLR2IP36954 125 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 RPL27P61353 136 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 ERVK-25P63136 954 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 PMPCAQ10713 525 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 PTGES3Q15185 160 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 ACKR1Q16570 336 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 EIF2S3LQ2VIR3 472 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 ARMC4Q5T2S8 1044 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 CLEC18BQ6UXF7 455 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 LNX2Q8N448 690 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 CLEC18CQ8NCF0 446 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 OR52L1Q8NGH7 329 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 OR4Q3Q8NH05 313 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 TEX47Q8TBZ9 253 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 TMEM45BQ96B21 275 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF775Q96BV0 537 aaPredicted RBP11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 INTS12Q96CB8 462 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 TBC1D23Q9NUY8 699 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 EMC3Q9P0I2 261 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF346Q9UL40 294 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 CLEC4AQ9UMR7 237 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 BAIAP2Q9UQB8 552 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 IER3IP1Q9Y5U9 82 aa11.02□□□□□ -0.65
NIF3L1-201ENST00000359683 FLNCQ14315 2725 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 A0A1B0GUH1 482 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 H0YJX3 145 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 CCL21O00585 134 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF432O94892 652 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 PPP1R3DO95685 299 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 SNAP29O95721 258 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 BCL10O95999 233 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 PLGP00747 810 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 AGTR1P30556 359 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 KIR2DL2P43627 348 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 UQCRFS1P47985 274 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 DAP3P51398 398 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 RPS6KA3P51812 740 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 CLDN17P56750 224 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms