RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 OR4K13Q8NH42 304 aa8.26□□□□□ -1.09
UPF2-202ENST00000357604 TIMD4Q96H15 378 aa8.26□□□□□ -1.09
UPF2-202ENST00000357604 INTS14Q96SY0 518 aa8.26□□□□□ -1.09
UPF2-202ENST00000357604 CLEC4AQ9UMR7 237 aa8.26□□□□□ -1.09
UPF2-202ENST00000357604 IGHV3-15A0A0B4J1V0 119 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 IGHG3P01860 377 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 PTNP21246 168 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 SNRPD2P62316 118 aaKnown RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 MEX3BQ6ZN04 569 aaKnown RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 CBR4Q8N4T8 237 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 OR13C2Q8NGS9 318 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 TIMP4Q99727 224 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 NIPAL2Q9H841 368 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 SRA1Q9HD15 236 aaKnown RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 DNASE1P24855 282 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 ZSCAN4Q8NAM6 433 aaPredicted RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 OR4F15Q8NGB8 312 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 OR8J1Q8NGP2 316 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 C11orf40Q8WZ69 217 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 ICAM5Q9UMF0 924 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 A0A1B0GVC2 190 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 TCRBV3S1A0A5B6 114 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 ROR2Q01974 943 aaKnown RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 NHSL2Q5HYW2 709 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 BCL2L15Q5TBC7 163 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 PIAS4Q8N2W9 510 aaPredicted RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 PFN4Q8NHR9 129 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 SLC25A44Q96H78 314 aaPredicted RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 PRDM14Q9GZV8 571 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 INPP5EQ9NRR6 644 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 TAS2R16Q9NYV7 291 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 FLRT3Q9NZU0 649 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 SDHAP31040 664 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 CD79BP40259 229 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 HTR5AP47898 357 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 ACSF3Q4G176 576 aaPredicted RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 ANKRD16Q6P6B7 361 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 VASH1Q7L8A9 365 aaPredicted RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 SLC35F2Q8IXU6 374 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 SYT14Q8NB59 555 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 GJC3Q8NFK1 279 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 RNASE6Q93091 150 aaKnown RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 DCLRE1CQ96SD1 692 aaKnown RBP8.25□□□□□ -1.09
UPF2-202ENST00000357604 PLEK2Q9NYT0 353 aa8.25□□□□□ -1.09
UPF2-202ENST00000357604 TEX13CA0A0J9YWL9 993 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 ANXA2P2A6NMY6 339 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 MSTNO14793 375 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 SLC16A7O60669 478 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 SOX14O95416 240 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 MAPK3P27361 379 aaPredicted RBP8.24□□□□□ -1.09
UPF2-202ENST00000357604 TIMP3P35625 211 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 PCBP3P57721 371 aaKnown RBP8.24□□□□□ -1.09
UPF2-202ENST00000357604 NKPD1Q17RQ9 610 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 TIMM50Q3ZCQ8 353 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 C6orf89Q6UWU4 347 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 SLC46A3Q7Z3Q1 461 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 ARMC10Q8N2F6 343 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 PNLDC1Q8NA58 520 aaKnown RBP8.24□□□□□ -1.09
UPF2-202ENST00000357604 SNRNP27Q8WVK2 155 aaKnown RBP8.24□□□□□ -1.09
UPF2-202ENST00000357604 TMEM45BQ96B21 275 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 RNFT2Q96EX2 444 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 FBXO34Q9NWN3 711 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 PDCD5O14737 125 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 RAD51DO75771 328 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 CLPSP04118 112 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 MPGP29372 298 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 ZP4Q12836 540 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 FAM189A2Q15884 450 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 SLC35F1Q5T1Q4 408 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 CCDC54Q8NEL0 328 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 TAAR8Q969N4 342 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 WDYHV1Q96HA8 205 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 KATNB1Q9BVA0 655 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 PNPLA3Q9NST1 481 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 ADAM30Q9UKF2 790 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 GSTK1Q9Y2Q3 226 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 TRBV4-1A0A0J9YWV2 114 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 SHISA8B8ZZ34 492 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 PIP5K1CO60331 668 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 CNOT4O95628 575 aaKnown RBP8.24□□□□□ -1.09
UPF2-202ENST00000357604 SERPINA5P05154 406 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 SLC3A1Q07837 685 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 TRAM1Q15629 374 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 C9orf135Q5VTT2 229 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 C1orf94Q6P1W5 598 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 OR6X1Q8NH79 312 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 CEP19Q96LK0 163 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 TNFRSF13CQ96RJ3 184 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 CIB1Q99828 191 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 BCL2L14Q9BZR8 327 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 CXorf56Q9H5V9 222 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 ZDHHC11Q9H8X9 412 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 LRRC30A6NM36 301 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 TIMM8AO60220 97 aaPredicted RBP8.24□□□□□ -1.09
UPF2-202ENST00000357604 F13BP05160 661 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 QDPRP09417 244 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 AGAP20933 346 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 MYL9P24844 172 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 INPP1P49441 399 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 FBXW9Q5XUX1 488 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms