RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 RPL26L1Q9UNX3 145 aaKnown RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 NPFFR2Q9Y5X5 522 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 LRRTM2O43300 516 aa6.77□□□□□ -1.32
VPS13A-202ENST00000357409 PPIHO43447 177 aaKnown RBP6.77□□□□□ -1.32
VPS13A-202ENST00000357409 LPLP06858 475 aa6.77□□□□□ -1.32
VPS13A-202ENST00000357409 NME2P22392 152 aa6.77□□□□□ -1.32
VPS13A-202ENST00000357409 PDLIM3Q53GG5 364 aaPredicted RBP6.77□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM196Q5HYL7 178 aa6.77□□□□□ -1.32
VPS13A-202ENST00000357409 OR4A16Q8NH70 328 aa6.77□□□□□ -1.32
VPS13A-202ENST00000357409 LCORQ96JN0 433 aaPredicted RBP6.77□□□□□ -1.32
VPS13A-202ENST00000357409 PLK3Q9H4B4 646 aa6.77□□□□□ -1.32
VPS13A-202ENST00000357409 PCDHGB6Q9Y5F9 930 aa6.77□□□□□ -1.32
VPS13A-202ENST00000357409 NUDT19A8MXV4 375 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 DUSP5Q16690 384 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF529Q6P280 563 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 BORCS7Q96B45 105 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.77□□□□□ -1.337e-7■■■■■ 33.2
VPS13A-202ENST00000357409 CDH10Q9Y6N8 788 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 LMO7Q8WWI1 1683 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 TAPBPO15533 448 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ALDOCP09972 364 aaKnown RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 HOXD8P13378 290 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 GIFP27352 417 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 CTGFP29279 349 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 GSK3AP49840 483 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 MFAP5Q13361 173 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 AGERQ15109 404 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 OGFOD3Q6PK18 319 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF322Q6U7Q0 402 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 LYPD4Q6UWN0 246 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 DPPA4Q7L190 304 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 C11orf42Q8N5U0 333 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 TMEM178AQ8NBL3 297 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SIMC1Q8NDZ2 872 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 OR5K2Q8NHB8 316 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ASB11Q8WXH4 323 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 FCGR1BQ92637 280 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 MSI2Q96DH6 328 aaKnown RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 NMES1Q9C002 83 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 IGKV3D-15A0A087WSY6 115 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 IGHV3-21A0A0B4J1V1 117 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 GPR31O00270 319 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SPRY1O43609 319 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 IGKV3-15P01624 115 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 IVDP26440 423 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF829Q3KNS6 432 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SBSNQ6UWP8 590 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ALKAL2Q6UX46 152 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 GPR148Q8TDV2 347 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF317Q96PQ6 595 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 RCE1Q9Y256 329 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 LOC102724200A0A096LPH7 203 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 HCRTR1O43613 425 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 IGHG1P01857 330 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 UGT2B10P36537 528 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SLC6A12P48065 614 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 TCTAP57738 103 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 MVKQ03426 396 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 AGAP7PQ5VUJ5 663 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 AGAP6Q5VW22 663 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 OR10K2Q6IF99 312 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 TIFABQ6ZNK6 161 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 OR51D1Q8NGF3 324 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ST8SIA4Q92187 359 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ELMOD3Q96FG2 381 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 AGAP4Q96P64 663 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 GORASP2Q9H8Y8 452 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 KCNG2Q9UJ96 466 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 IGHV3OR16-10A0A075B7F0 116 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 IGKV6D-21A0A0A0MT36 114 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 C3orf80F5H4A9 247 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SMAD7O15105 426 aaKnown RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 TXNL1O43396 289 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SSX4O60224 188 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 NSA2O95478 260 aaKnown RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 CLEC2LP0C7M8 214 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 GAAP10253 952 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 TAS2R43P59537 309 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 EBPQ15125 230 aaKnown RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 DPY19L2P1Q6NXN4 242 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 PRSS41Q7RTY9 318 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 RFESDQ8TAC1 157 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SOX7Q9BT81 388 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SELENOKQ9Y6D0 94 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 A0A1B0GVG6 124 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 MYF6P23409 242 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 TGFBR1P36897 503 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SPRED3Q2MJR0 410 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 LCTLQ6UWM7 567 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF534Q76KX8 674 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 OR4M1Q8NGD0 313 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 TMEM14AQ9Y6G1 99 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 OR6C76A6NM76 312 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 H3BP45 60 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 DEGS1O15121 323 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 OR5G3P0C626 314 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SLC1A3P43003 542 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ID4P47928 161 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 DUSP7Q16829 419 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 NKAIN1Q4KMZ8 207 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms