RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SYT6Q5T7P8 510 aaPredicted RBP16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 UBE2UQ5VVX9 321 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 FAM109AQ8N4B1 249 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 CYB561A3Q8NBI2 242 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 SLC37A3Q8NCC5 494 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 LSM14AQ8ND56 463 aaKnown RBP16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 TM9SF4Q92544 642 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 PTP4A1Q93096 173 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 ADGRG7Q96K78 797 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 DDOQ99489 341 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 MFRPQ9BY79 579 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 B3GALT5Q9Y2C3 310 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 LIPGQ9Y5X9 500 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 CEPT1Q9Y6K0 416 aa16.26■□□□□ 0.19
SMARCD3-202ENST00000356800 PRR23D1E9PI22 279 aaPredicted RBP16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 RAMP1O60894 148 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 INMTO95050 263 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 OR6A2O95222 327 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 PLGP00747 810 aaPredicted RBP16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 ITGB2P05107 769 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 PRR23D2P0DMB1 279 aaPredicted RBP16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 PAICSP22234 425 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 SDHAP31040 664 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 SLC35A1P78382 337 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 TMED1Q13445 227 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 ZNF239Q16600 458 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 EMC4Q5J8M3 183 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 NIPAL3Q6P499 406 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 NHLRC1Q6VVB1 395 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 MEPCEQ7L2J0 689 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 NPEPL1Q8NDH3 523 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 ADPRHL1Q8NDY3 354 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 SDR9C7Q8NEX9 313 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 ZPLD1Q8TCW7 415 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 LGALS12Q96DT0 336 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 RNFT2Q96EX2 444 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 ZDHHC11Q9H8X9 412 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 ACKR4Q9NPB9 350 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 FANCFQ9NPI8 374 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 B3GAT1Q9P2W7 334 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 ZNF346Q9UL40 294 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 DIMT1Q9UNQ2 313 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 COMMD3-BMI1R4GMX3 469 aa16.25■□□□□ 0.19
SMARCD3-202ENST00000356800 GJE1A6NN92 205 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 H3BSA7 217 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 LINC01387J3KSC0 135 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 SERPINI2O75830 405 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 IGHMP01871 453 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 ADRA2AP08913 450 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 POU3F2P20265 443 aaPredicted RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 DCKP27707 260 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 CDKN2AP42771 156 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 LHX2P50458 406 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 UCNP55089 124 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 GP2P55259 537 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 H3F3AP84243 136 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 ZNF169Q14929 603 aaPredicted RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 ACKR1Q16570 336 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 ARMC4Q5T2S8 1044 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 GPR139Q6DWJ6 353 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 UBQLNLQ8IYU4 475 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 RBMXL3Q8N7X1 1067 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 FAM98AQ8NCA5 519 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 OR52I1Q8NGK6 324 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 EXTL1Q92935 676 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 CRELD1Q96HD1 420 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 NMNAT3Q96T66 252 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 SRXN1Q9BYN0 137 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 DEFB127Q9H1M4 99 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 FGF20Q9NP95 211 aaPredicted RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 GRHPRQ9UBQ7 328 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 A0A087WV48 116 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 A0A1W2PNV4 684 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 AQP7P3A6NL99 342 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 MKRN2OSH3BPM6 223 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 ACOT7O00154 380 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 EIF1AYO14602 144 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 SEC14L5O43304 696 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 SLC10A1Q14973 349 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 MESTQ5EB52 335 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 PAQR6Q6TCH4 344 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 Q6ZS92 163 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 WDFY1Q8IWB7 410 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 GHDCQ8N2G8 530 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 ZNF519Q8TB69 540 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 SNRNP27Q8WVK2 155 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 OTULINQ96BN8 352 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 TXNIPQ9H3M7 391 aa16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 WARS2Q9UGM6 360 aaKnown RBP16.24■□□□□ 0.19
SMARCD3-202ENST00000356800 ATMQ13315 3056 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 MED19A0JLT2 244 aaPredicted RBP16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 OR6C68A6NDL8 312 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 SLC22A31A6NKX4 558 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 ZNF701M0R085 212 aaPredicted RBP16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 RAB36O95755 333 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 CLUP10909 449 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 SLC2A5P22732 501 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 CLDN18P56856 261 aa16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 RPL27P61353 136 aaKnown RBP16.23■□□□□ 0.19
SMARCD3-202ENST00000356800 KRR1Q13601 381 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms