RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 BEND4Q6ZU67 534 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 SLC35D2Q76EJ3 337 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 PQLC1Q8N2U9 271 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 ATG16L2Q8NAA4 619 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 MOSPD2Q8NHP6 518 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 GTPBP3Q969Y2 492 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 OSBPL10Q9BXB5 764 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 MCCC2Q9HCC0 563 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 JKAMPQ9P055 326 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 STX18Q9P2W9 335 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 DOCK7Q96N67 2140 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 ZNF726A6NNF4 738 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 A8MXE2 369 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 H0YHG0 523 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 BCL10O95999 233 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 IFNGR1P15260 489 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 ELF3P78545 371 aaPredicted RBP13.78□□□□□ -0.2
TRIM13-201ENST00000356017 TFAP2EQ6VUC0 442 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 NHLRC1Q6VVB1 395 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 RASSF6Q6ZTQ3 369 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 RELL2Q8NC24 303 aaPredicted RBP13.78□□□□□ -0.2
TRIM13-201ENST00000356017 FANK1Q8TC84 345 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 UCK2Q9BZX2 261 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 TXNIPQ9H3M7 391 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 KIF17Q9P2E2 1029 aa13.78□□□□□ -0.2
TRIM13-201ENST00000356017 HIVEP3Q5T1R4 2406 aa13.77□□□□□ -0.2
TRIM13-201ENST00000356017 MCIDASD6RGH6 385 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 BAG2O95816 211 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 PRKACGP22612 351 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 NTF4P34130 210 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 ASCL1P50553 236 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 CTXN1P60606 82 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 RFX4Q33E94 735 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 NIPAL3Q6P499 406 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 DPY19L2P2Q6ZN68 376 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 ZNF620Q6ZNG0 422 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 LUZP2Q86TE4 346 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 MED12LQ86YW9 2145 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 HS3ST5Q8IZT8 346 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 CLDN22Q8N7P3 220 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 ZNF610Q8N9Z0 462 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 LRRC75AQ8NAA5 344 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 ICA1LQ8NDH6 482 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 OR6X1Q8NH79 312 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 GPX7Q96SL4 187 aaPredicted RBP13.77□□□□□ -0.21
TRIM13-201ENST00000356017 NIPSNAP1Q9BPW8 284 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 OR52D1Q9H346 318 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 MED29Q9NX70 200 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 IL20Q9NYY1 176 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 FOXD3Q9UJU5 478 aaPredicted RBP13.77□□□□□ -0.21
TRIM13-201ENST00000356017 OAZ3Q9UMX2 235 aa13.77□□□□□ -0.21
TRIM13-201ENST00000356017 UBR5O95071 2799 aaPredicted RBP13.76□□□□□ -0.21
TRIM13-201ENST00000356017 SLC35F4A4IF30 521 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 FAM90A27PA6NNH2 459 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 SLC43A1O75387 559 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 ZNF432O94892 652 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 IGHMP01871 453 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 CD14P08571 375 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 SLC6A6P31641 620 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 SELENOPP49908 381 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 BIDP55957 195 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 ACKR1Q16570 336 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 FBXL19-AS1Q494R0 122 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 FBXW9Q5XUX1 488 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 UBE2J2Q8N2K1 259 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 OR52L1Q8NGH7 329 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 TXNDC15Q96J42 360 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 POLDIP3Q9BY77 421 aaKnown RBP13.76□□□□□ -0.21
TRIM13-201ENST00000356017 GABARAPL1Q9H0R8 117 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 OPN3Q9H1Y3 402 aaPredicted RBP13.76□□□□□ -0.21
TRIM13-201ENST00000356017 SLCO5A1Q9H2Y9 848 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 NRIP3Q9NQ35 241 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 ELOVL5Q9NYP7 299 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 GRHPRQ9UBQ7 328 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 MAGED1Q9Y5V3 778 aaPredicted RBP13.76□□□□□ -0.21
TRIM13-201ENST00000356017 CDH10Q9Y6N8 788 aa13.76□□□□□ -0.21
TRIM13-201ENST00000356017 NCOA6Q14686 2063 aaPredicted RBP13.76□□□□□ -0.21
TRIM13-201ENST00000356017 KRT33AO76009 404 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 APEHP13798 732 aaKnown RBP13.75□□□□□ -0.21
TRIM13-201ENST00000356017 PCYT1AP49585 367 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 RPS6KA3P51812 740 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 FXYD6P3P58550 94 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 RPL27P61353 136 aaKnown RBP13.75□□□□□ -0.21
TRIM13-201ENST00000356017 GPR139Q6DWJ6 353 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 FAHD1Q6P587 224 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 Q6ZT83 130 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 ABHD12BQ7Z5M8 362 aaPredicted RBP13.75□□□□□ -0.21
TRIM13-201ENST00000356017 SLC25A44Q96H78 314 aaPredicted RBP13.75□□□□□ -0.21
TRIM13-201ENST00000356017 LRR1Q96L50 414 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 OR2M2Q96R28 347 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 EMC6Q9BV81 110 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 KATNB1Q9BVA0 655 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 RBM24Q9BX46 236 aaKnown RBP13.75□□□□□ -0.21
TRIM13-201ENST00000356017 LINC00470Q9BZP3 86 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 DCLRE1BQ9H816 532 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 ASB6Q9NWX5 421 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 UPB1Q9UBR1 384 aa13.75□□□□□ -0.21
TRIM13-201ENST00000356017 MALT1Q9UDY8 824 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms