RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 MKKSQ9NPJ1 570 aaPredicted RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 SERGEFQ9UGK8 458 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 LAMP5Q9UJQ1 280 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 SZT2Q5T011 3432 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 OR14I1A6ND48 311 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 TMEM200CA6NKL6 621 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 TO15178 435 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 FGF17O60258 216 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 ADAM11O75078 769 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 NDUFB2O95178 105 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 DCNP07585 359 aaKnown RBP12.46□□□□□ -0.42
TRIM4-203ENST00000355947 AKR1C4P17516 323 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 DLSTP36957 453 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 ACTR1BP42025 376 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 ACTR1AP61163 376 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 RUNX2Q13950 521 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 DEFB115Q30KQ5 88 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 PXKQ7Z7A4 578 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 TTLQ8NG68 377 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 OR4S1Q8NGB4 309 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 SLC6A7Q99884 636 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.42
TRIM4-203ENST00000355947 ALG12Q9BV10 488 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 LDAHQ9H6V9 325 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 FLRT3Q9NZU0 649 aa12.46□□□□□ -0.42
TRIM4-203ENST00000355947 TSPAN11A1L157 253 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 C1QTNF3-AMACRE9PGA6 284 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 NID1P14543 1247 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 LAG3P18627 525 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 EIF2B1Q14232 305 aaKnown RBP12.45□□□□□ -0.42
TRIM4-203ENST00000355947 RBM39Q14498 530 aaKnown RBP12.45□□□□□ -0.42
TRIM4-203ENST00000355947 HACD4Q5VWC8 232 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 TMEM205Q6UW68 189 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 ZNF227Q86WZ6 799 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 LINC00518Q8N0U6 118 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 FRMD1Q8N878 549 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 FBXO17Q96EF6 278 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 ZNF578Q96N58 590 aaPredicted RBP12.45□□□□□ -0.42
TRIM4-203ENST00000355947 TINAGL1Q9GZM7 467 aaPredicted RBP12.45□□□□□ -0.42
TRIM4-203ENST00000355947 PHPT1Q9NRX4 125 aaPredicted RBP12.45□□□□□ -0.42
TRIM4-203ENST00000355947 GMEB2Q9UKD1 530 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 TPPPO94811 219 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 NDUFB6O95139 128 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 RAB3DO95716 219 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 OR2T7P0C7T2 308 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 RAB3AP20336 220 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 PBX2P40425 430 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 POU3F4P49335 361 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 HNRNPA1L2Q32P51 320 aaKnown RBP12.45□□□□□ -0.42
TRIM4-203ENST00000355947 C2orf27AQ580R0 203 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 ZNF542PQ5EBM4 170 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 OR2T27Q8NH04 317 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 GFI1Q99684 422 aa12.45□□□□□ -0.42
TRIM4-203ENST00000355947 CMSS1Q9BQ75 279 aaKnown RBP12.45□□□□□ -0.42
TRIM4-203ENST00000355947 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
TRIM4-203ENST00000355947 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 A0A1B0GV50 99 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 PRR32B1ATL7 298 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 EIF1AYO14602 144 aaKnown RBP12.44□□□□□ -0.42
TRIM4-203ENST00000355947 SPI1P17947 270 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 PRSS3P35030 304 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 CTXN1P60606 82 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 RPS11P62280 158 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM4-203ENST00000355947 IRF4Q15306 451 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 SMAD2Q15796 467 aaKnown RBP12.44□□□□□ -0.42
TRIM4-203ENST00000355947 SPRED2Q7Z698 418 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 ARMC10Q8N2F6 343 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 C12orf45Q8N5I9 185 aaPredicted RBP12.44□□□□□ -0.42
TRIM4-203ENST00000355947 OR52R1Q8NGF1 315 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 OR1S2Q8NGQ3 325 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 OR1J2Q8NGS2 313 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 TSACCQ96A04 125 aaPredicted RBP12.44□□□□□ -0.42
TRIM4-203ENST00000355947 MOAP1Q96BY2 351 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 GIMAP5Q96F15 307 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 RNF208Q9H0X6 261 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 EPHX3Q9H6B9 360 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 NPDC1Q9NQX5 325 aaPredicted RBP12.44□□□□□ -0.42
TRIM4-203ENST00000355947 ADAM29Q9UKF5 820 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 DENND4CQ5VZ89 1909 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 ZNF98A6NK75 572 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 P2RX6O15547 441 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 KLF4O43474 513 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 KCNJ13O60928 360 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 OR6A2O95222 327 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 HLA-AP01891 365 aaKnown RBP12.44□□□□□ -0.42
TRIM4-203ENST00000355947 CT62P0C5K7 136 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 ADAM8P78325 824 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 LHX8Q68G74 356 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 KIRREL2Q6UWL6 708 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 CMIPQ8IY22 773 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 ACBD4Q8NC06 268 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 THAP6Q8TBB0 222 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 PATE1Q8WXA2 126 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 ATOH1Q92858 354 aaPredicted RBP12.44□□□□□ -0.42
TRIM4-203ENST00000355947 FANCFQ9NPI8 374 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 SLC22A11Q9NSA0 550 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 SLC22A13Q9Y226 551 aa12.44□□□□□ -0.42
TRIM4-203ENST00000355947 KLHDC2Q9Y2U9 406 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms