RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-202ENST00000355480 TMEM221A6NGB7 291 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 TBC1D28Q2M2D7 210 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 BRICD5Q6PL45 260 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 DEFB123Q8N688 67 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 DNAJC5GQ8N7S2 189 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 OR4A16Q8NH70 328 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 ELP4Q96EB1 424 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF419Q96HQ0 510 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF583Q96ND8 569 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 SLA2Q9H6Q3 261 aa16.65■□□□□ 0.26
COL18A1-202ENST00000355480 H0Y8X5 98 aa16.64■□□□□ 0.26
COL18A1-202ENST00000355480 TAPBPO15533 448 aa16.64■□□□□ 0.26
COL18A1-202ENST00000355480 NKX6-1P78426 367 aaPredicted RBP16.64■□□□□ 0.26
COL18A1-202ENST00000355480 BEX5Q5H9J7 111 aa16.64■□□□□ 0.26
COL18A1-202ENST00000355480 NXNL2Q5VZ03 156 aa16.64■□□□□ 0.26
COL18A1-202ENST00000355480 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.26
COL18A1-202ENST00000355480 RPS19BP1Q86WX3 136 aaKnown RBP16.64■□□□□ 0.26
COL18A1-202ENST00000355480 PARP16Q8N5Y8 322 aa16.64■□□□□ 0.26
COL18A1-202ENST00000355480 OR51D1Q8NGF3 324 aa16.64■□□□□ 0.26
COL18A1-202ENST00000355480 SLC38A1Q9H2H9 487 aa16.64■□□□□ 0.26
COL18A1-202ENST00000355480 SLC22A23A1A5C7 686 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 Q499Y3 187 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 HENMT1Q5T8I9 393 aaKnown RBP16.64■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF836Q6ZNA1 936 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 MMP17Q9ULZ9 603 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 K7ESM1 405 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 KCNAB1Q14722 419 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 RBMXL1Q96E39 390 aaKnown RBP16.64■□□□□ 0.25
COL18A1-202ENST00000355480 UBE2ZQ9H832 354 aaPredicted RBP16.64■□□□□ 0.25
COL18A1-202ENST00000355480 B3GAT1Q9P2W7 334 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 CHD4Q14839 1912 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 MEIOCA2RUB1 952 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 SYT5O00445 386 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 ADAM23O75077 832 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 EVI2BP34910 448 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 NKAIN1Q4KMZ8 207 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 TMEM240Q5SV17 173 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 METRNLQ641Q3 311 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 SYT13Q7L8C5 426 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 APH1AQ96BI3 265 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 COQ3Q9NZJ6 369 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 EIF4EP06730 217 aaKnown RBP16.64■□□□□ 0.25
COL18A1-202ENST00000355480 ELAVL4P26378 380 aaKnown RBP16.64■□□□□ 0.25
COL18A1-202ENST00000355480 CAMK2BQ13554 666 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 DUSP6Q16828 381 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 C1orf140Q5VVS0 124 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 CST9LP1Q5W188 147 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 Q6ZTK2 550 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 KANSL1Q7Z3B3 1105 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 CMIPQ8IY22 773 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 PM20D2Q8IYS1 436 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 OR5M1Q8NGP8 315 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 CENPOQ9BU64 300 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 MYH10P35580 1976 aa16.64■□□□□ 0.25
COL18A1-202ENST00000355480 PEA15Q15121 130 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 RNLSQ5VYX0 342 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SIRT6Q8N6T7 355 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SLC16A11Q8NCK7 471 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 ANKRD9Q96BM1 317 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-202ENST00000355480 NIPAL2Q9H841 368 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 TMEM82A0PJX8 343 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 LRRC30A6NM36 301 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 CLN5O75503 358 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 TRHRP34981 398 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-202ENST00000355480 MFGE8Q08431 387 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SHISA7A6NL88 538 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 AKR1C1Q04828 323 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 NUMA1Q14980 2115 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SPCS2Q15005 226 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SSX2Q16385 188 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 IDO2Q6ZQW0 420 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 CHTF18Q8WVB6 975 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 BIN3Q9NQY0 253 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF891A8MT65 544 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-202ENST00000355480 CTDSP2O14595 271 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 UBCP0CG48 685 aaKnown RBP16.63■□□□□ 0.25
COL18A1-202ENST00000355480 HMGA1P17096 107 aaKnown RBP16.63■□□□□ 0.25
COL18A1-202ENST00000355480 MEP1BQ16820 701 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SHEQ5VZ18 495 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SYT9Q86SS6 491 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SCCPDHQ8NBX0 429 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 LGALS14Q8TCE9 139 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 TBC1D29Q9UFV1 150 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 CLDN24A6NM45 220 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SULT1C2O00338 296 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 ARHGAP33O14559 1287 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 IGHV3-9P01782 118 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 CD14P08571 375 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 OLIG3Q7RTU3 272 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF546Q86UE3 836 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 SLC22A24Q8N4F4 322 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 LYRM4Q9HD34 91 aa16.63■□□□□ 0.25
COL18A1-202ENST00000355480 TMEM202A6NGA9 273 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF705FA8MVS1 300 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF705DP0CH99 300 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF705BP0CI00 300 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-202ENST00000355480 OMGP23515 440 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 HES1Q14469 280 aa16.62■□□□□ 0.25
COL18A1-202ENST00000355480 LYPD4Q6UWN0 246 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms