RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 MESTQ5EB52 335 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 SLC22A10Q63ZE4 541 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 KMT5CQ86Y97 462 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 C9orf40Q8IXQ3 194 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 OR1N1Q8NGS0 311 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 OR5AK2Q8NH90 309 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 RNF166Q96A37 237 aaPredicted RBP20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 ZNF524Q96C55 264 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 KLHL15Q96M94 604 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 LAMP5Q9UJQ1 280 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 V9GY05 133 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 A0A0B4J203 849 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 CENPBD1B2RD01 187 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 PHYHO14832 338 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 UPK3AO75631 287 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 ZNF432O94892 652 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 MT-ATP6P00846 226 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 GLB1P16278 677 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 SRP9P49458 86 aaKnown RBP20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 PLCXD2Q0VAA5 305 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 Q499Y3 187 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 EEF1A1P5Q5VTE0 462 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 LIPNQ5VXI9 398 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 SPEM1Q8N4L4 309 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 LGALS14Q8TCE9 139 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 ZFAND1Q8TCF1 268 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 SLC41A2Q96JW4 573 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 WWTR1Q9GZV5 400 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 WDR76Q9H967 626 aa20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 ZNF275Q9NSD4 429 aaPredicted RBP20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 MRM2Q9UI43 246 aaKnown RBP20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 ZNF346Q9UL40 294 aaKnown RBP20.2■□□□□ 0.82
NKX2-1-201ENST00000354822 PRR32B1ATL7 298 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 PSMD9O00233 223 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 SLC25A12O75746 678 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 BGLAPP02818 100 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 CD3GP09693 182 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 GP1BBP13224 206 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 PRKCAP17252 672 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 CSNK1EP49674 416 aaKnown RBP20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 TNK1Q13470 666 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 VWA2Q5GFL6 755 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 MAMDC2Q7Z304 686 aaPredicted RBP20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 MARCH3Q86UD3 253 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 PLCZ1Q86YW0 608 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 OR6V1Q8N148 313 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 MAP6Q96JE9 813 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 DPYSL5Q9BPU6 564 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 GTPBP2Q9BX10 602 aaKnown RBP20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 GON7Q9BXV9 100 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 GALNT9Q9HCQ5 603 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 CEP192Q8TEP8 1941 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 ACOD1A6NK06 481 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 C4orf47A7E2U8 309 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 ARHGEF9O43307 516 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 TCRBP04435 133 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 OR8G3PP0DMU2 310 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 RAG2P55895 527 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 DGCR2P98153 550 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 CBFBQ13951 182 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 EFR3AQ14156 821 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 ARHGAP40Q5TG30 622 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 SIAH3Q8IW03 269 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 SMIM4Q8WVI0 70 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 SMAD5Q99717 465 aaKnown RBP20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 RTN4RQ9BZR6 473 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 BOLA1Q9Y3E2 137 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 MPDZO75970 2070 aa20.19■□□□□ 0.82
NKX2-1-201ENST00000354822 A0A0A6YYJ9 748 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 A0A1B0GX78 115 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 C7orf66A4D0T2 115 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 RPP14O95059 124 aaKnown RBP20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 FOLR1P15328 257 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 CFHR1Q03591 330 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 PRSS42Q7Z5A4 293 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 CMTM4Q8IZR5 234 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 SIX5Q8N196 739 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 GRPEL2Q8TAA5 225 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 RGP1Q92546 391 aaPredicted RBP20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 OMA1Q96E52 524 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 SCMH1Q96GD3 660 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 NRSN2Q9GZP1 204 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 TCF7L1Q9HCS4 588 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 CDC14CA4D256 554 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 DCTN6O00399 190 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 XKRYO14609 159 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 NUDT14O95848 222 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 ABHD16AO95870 558 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 CALCBP10092 127 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 ALOX5APP20292 161 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 CENPAP49450 140 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 PRAMEF17Q5VTA0 474 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 ZNF433Q8N7K0 673 aaPredicted RBP20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 GFI1Q99684 422 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 CACNG6Q9BXT2 260 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 ACTR6Q9GZN1 396 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 MED28Q9H204 178 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 PLSCR3Q9NRY6 295 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 NUDT15Q9NV35 164 aa20.18■□□□□ 0.82
NKX2-1-201ENST00000354822 FRRS1LQ9P0K9 344 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms